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java.lang.Objectjava.lang.Enum<PeptideFragmentIon.PeptideFragmentIonType>
com.compomics.util.experiment.biology.ions.PeptideFragmentIon.PeptideFragmentIonType
public static enum PeptideFragmentIon.PeptideFragmentIonType
An enumerator of the supported fragment ion types.
Enum Constant Summary | |
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A_ION
This int is the identifier for an a ion. |
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AH2O_ION
This int is the identifier for an a ion with H2O loss. |
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ANH3_ION
This int is the identifier for an a ion with NH3 loss. |
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B_ION
This int is the identifier for a b ion. |
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BH2O_ION
This int is the identifier for a b ion with H2O loss. |
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BNH3_ION
This int is the identifier for a b ion with NH3 loss. |
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C_ION
This int is the identifier for a c ion. |
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IMMONIUM_A
This int is the identifier for an alanine immonium ion. |
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IMMONIUM_C
This int is the identifier for a cysteine immonium ion. |
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IMMONIUM_D
This int is the identifier for an aspartic acid immonium ion. |
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IMMONIUM_E
This int is the identifier for a glutamic acid immonium ion. |
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IMMONIUM_F
This int is the identifier for a phenylalanine acid immonium ion. |
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IMMONIUM_G
This int is the identifier for a glycine acid immonium ion. |
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IMMONIUM_H
This int is the identifier for an histidine acid immonium ion. |
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IMMONIUM_I
This int is the identifier for an isoleucine acid immonium ion. |
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IMMONIUM_K
This int is the identifier for a lysine acid immonium ion. |
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IMMONIUM_L
This int is the identifier for a leucine acid immonium ion. |
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IMMONIUM_M
This int is the identifier for a methionine acid immonium ion. |
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IMMONIUM_N
This int is the identifier for an asparagine immonium ion. |
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IMMONIUM_P
This int is the identifier for a proline acid immonium ion. |
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IMMONIUM_Q
This int is the identifier for a glutamine acid immonium ion. |
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IMMONIUM_R
This int is the identifier for an arginine immonium ion. |
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IMMONIUM_S
This int is the identifier for a serine acid immonium ion. |
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IMMONIUM_T
This int is the identifier for a threonine acid immonium ion. |
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IMMONIUM_V
This int is the identifier for a valine acid immonium ion. |
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IMMONIUM_W
This int is the identifier for a tryptophan acid immonium ion. |
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IMMONIUM_Y
This int is the identifier for a tyrosine acid immonium ion. |
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MH_ION
This int is the identifier for an MH ion. |
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MHH2O_ION
This int is the identifier for an MH-H2O ion. |
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MHNH3_ION
This int is the identifier for an MH-NH3 ion. |
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PRECURSOR_LOSS
This int is the identifier for a precursor ion loss. |
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UNKNOWN
This int is the identifier for an unknown ion. |
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X_ION
This int is the identifier for a x ion. |
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Y_ION
This int is the identifier for a y ion. |
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YH2O_ION
This int is the identifier for a y ion with H2O loss. |
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YNH3_ION
This int is the identifier for a y ion with NH3 loss. |
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Z_ION
This int is the identifier for a z ion. |
Method Summary | |
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static PeptideFragmentIon.PeptideFragmentIonType |
valueOf(String name)
Returns the enum constant of this type with the specified name. |
static PeptideFragmentIon.PeptideFragmentIonType[] |
values()
Returns an array containing the constants of this enum type, in the order they are declared. |
Methods inherited from class java.lang.Enum |
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clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf |
Methods inherited from class java.lang.Object |
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getClass, notify, notifyAll, wait, wait, wait |
Enum Constant Detail |
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public static final PeptideFragmentIon.PeptideFragmentIonType A_ION
public static final PeptideFragmentIon.PeptideFragmentIonType ANH3_ION
public static final PeptideFragmentIon.PeptideFragmentIonType AH2O_ION
public static final PeptideFragmentIon.PeptideFragmentIonType B_ION
public static final PeptideFragmentIon.PeptideFragmentIonType BNH3_ION
public static final PeptideFragmentIon.PeptideFragmentIonType BH2O_ION
public static final PeptideFragmentIon.PeptideFragmentIonType C_ION
public static final PeptideFragmentIon.PeptideFragmentIonType X_ION
public static final PeptideFragmentIon.PeptideFragmentIonType Y_ION
public static final PeptideFragmentIon.PeptideFragmentIonType YNH3_ION
public static final PeptideFragmentIon.PeptideFragmentIonType YH2O_ION
public static final PeptideFragmentIon.PeptideFragmentIonType Z_ION
public static final PeptideFragmentIon.PeptideFragmentIonType MH_ION
public static final PeptideFragmentIon.PeptideFragmentIonType MHNH3_ION
public static final PeptideFragmentIon.PeptideFragmentIonType MHH2O_ION
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_A
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_R
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_N
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_D
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_C
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_E
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_Q
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_G
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_H
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_I
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_L
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_K
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_M
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_F
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_P
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_S
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_T
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_W
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_Y
public static final PeptideFragmentIon.PeptideFragmentIonType IMMONIUM_V
public static final PeptideFragmentIon.PeptideFragmentIonType PRECURSOR_LOSS
public static final PeptideFragmentIon.PeptideFragmentIonType UNKNOWN
Method Detail |
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public static PeptideFragmentIon.PeptideFragmentIonType[] values()
for (PeptideFragmentIon.PeptideFragmentIonType c : PeptideFragmentIon.PeptideFragmentIonType.values()) System.out.println(c);
public static PeptideFragmentIon.PeptideFragmentIonType valueOf(String name)
name
- the name of the enum constant to be returned.
IllegalArgumentException
- if this enum type has no constant
with the specified name
NullPointerException
- if the argument is null
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