Uses of Class
com.compomics.util.experiment.biology.ions.PeptideFragmentIon

Packages that use PeptideFragmentIon
com.compomics.util.experiment.biology This package contains experiement classes related to biological entities. 
 

Uses of PeptideFragmentIon in com.compomics.util.experiment.biology
 

Methods in com.compomics.util.experiment.biology that return types with arguments of type PeptideFragmentIon
 Iterator<PeptideFragmentIon> Peptide.fragmentIterator()
          Method which returns an iterator on the fragment ions
 ArrayList<PeptideFragmentIon> FragmentFactory.getFragmentIons(Peptide peptide)
          This method returns the theoretic fragment ions expected from a peptide sequence.
 

Methods in com.compomics.util.experiment.biology with parameters of type PeptideFragmentIon
 void Peptide.addFragmentIon(PeptideFragmentIon fragment)
          method to add a fragmentIon
 



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