com.compomics.software
Class ToolFactory

java.lang.Object
  extended by com.compomics.software.ToolFactory

public class ToolFactory
extends Object

This class can be used to start compomics tools.

Author:
Marc Vaudel

Constructor Summary
ToolFactory()
           
 
Method Summary
static void startPeptideShaker(JFrame parent)
          Starts PeptideShaker from the location of utilities preferences.
static void startRelims(JFrame parent)
          Deprecated. use PeptideShaker's own Reshake option instead.
static void startReporter(JFrame parent)
          Starts Reporter from the location of utilities preferences.
static void startSearchGUI(JFrame parent)
          Starts SearchGUI from the location of utilities preferences.
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

ToolFactory

public ToolFactory()
Method Detail

startPeptideShaker

public static void startPeptideShaker(JFrame parent)
                               throws FileNotFoundException,
                                      IOException,
                                      ClassNotFoundException,
                                      InterruptedException
Starts PeptideShaker from the location of utilities preferences.

Parameters:
parent - a frame to display the path setting dialog
Throws:
FileNotFoundException
IOException
ClassNotFoundException
InterruptedException

startReporter

public static void startReporter(JFrame parent)
                          throws FileNotFoundException,
                                 IOException,
                                 ClassNotFoundException,
                                 InterruptedException
Starts Reporter from the location of utilities preferences.

Parameters:
parent - a frame to display the path setting dialog.
Throws:
FileNotFoundException
IOException
ClassNotFoundException
InterruptedException

startRelims

public static void startRelims(JFrame parent)
                        throws FileNotFoundException,
                               IOException,
                               ClassNotFoundException,
                               InterruptedException
Deprecated. use PeptideShaker's own Reshake option instead.

Starts Relims from the location of utilities preferences.

Parameters:
parent - a frame to display the path setting dialog.
Throws:
FileNotFoundException
IOException
ClassNotFoundException
InterruptedException

startSearchGUI

public static void startSearchGUI(JFrame parent)
                           throws FileNotFoundException,
                                  IOException,
                                  ClassNotFoundException,
                                  InterruptedException
Starts SearchGUI from the location of utilities preferences.

Parameters:
parent - a frame to display the path setting dialog.
Throws:
FileNotFoundException
IOException
ClassNotFoundException
InterruptedException


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