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Packages that use Enzyme | |
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com.compomics.util.io | This package contains classes related to input/output. |
com.compomics.util.protein | The classes in this package concern useful Objects and their operations for modelling and handling proteins. |
Uses of Enzyme in com.compomics.util.io |
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Methods in com.compomics.util.io that return Enzyme | |
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Enzyme |
MascotEnzymeReader.getEnzyme(String aTitle)
This method will return a copy of an Enzyme instance for the given name, or 'null' if the enzyme was not found in the current list. |
Uses of Enzyme in com.compomics.util.protein |
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Subclasses of Enzyme in com.compomics.util.protein | |
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class |
DualEnzyme
This class implements an enzyme with a dual specificity; the N-terminus of a resultant peptide will have certain residue, the C-terminus will have another, eg. for a C-terminal cutter with N-terminal specificty for 'D' and C-terminal specificity for 'R': (D)XXXXXR; for an N-terminal cutter with N-terminal specificty for 'W' and C-terminal specificity for 'K': WXXXXX(K). |
class |
RegExEnzyme
This class implements the functionality of an Enzyme by simulating digestion based on a regular expression. |
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