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Packages that use com.compomics.util.interfaces | |
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com.compomics.util.general | The classes in this package focus mainly on very general, top-level tasks that are used throughout the other packages in the util section. |
com.compomics.util.gui | This package contains basic GUI classes. |
com.compomics.util.gui.spectrum | This package contains GUI classes related to Spectrum and Chromatogram visualization. |
com.compomics.util.gui.utils | |
com.compomics.util.io | This package contains classes related to input/output. |
com.compomics.util.nucleotide | The classes in this package concern useful Objects and their operations for modelling and handling nucleotides. |
com.compomics.util.protein | The classes in this package concern useful Objects and their operations for modelling and handling proteins. |
Classes in com.compomics.util.interfaces used by com.compomics.util.general | |
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Logger
This interface describes the behaviour for a class that can log messages. |
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SpectrumFile
This interface describes the behaviour for a spectrum file (ie., PKL file, Mascot Generic file, dat file, ...). |
Classes in com.compomics.util.interfaces used by com.compomics.util.gui | |
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Flamable
This interface describes the behaviour for classes that can handle unrecoverable errors and exceptions, thrown by child threads etc. |
Classes in com.compomics.util.interfaces used by com.compomics.util.gui.spectrum | |
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SpectrumFile
This interface describes the behaviour for a spectrum file (ie., PKL file, Mascot Generic file, dat file, ...). |
Classes in com.compomics.util.interfaces used by com.compomics.util.gui.utils | |
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Connectable
This interface describes the behaviour for classes that can accept an incoming DB connection. |
Classes in com.compomics.util.interfaces used by com.compomics.util.io | |
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Monitorable
This interface describes the behaviour for any Object whose progressing state can be monitored. |
Classes in com.compomics.util.interfaces used by com.compomics.util.nucleotide | |
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Sequence
This interface defines the default behaviour of any kind of sequence with a certain mass - be it DNA, portein or something else. |
Classes in com.compomics.util.interfaces used by com.compomics.util.protein | |
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Modification
This interface describes the behaviour for a modification on a peptide or aminoacid sequence. |
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Sequence
This interface defines the default behaviour of any kind of sequence with a certain mass - be it DNA, portein or something else. |
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