See: Description
Interface | Description |
---|---|
Advocate |
The advocate of a hit can be a search engine, a re-scoring algorithm, etc.
|
Class | Description |
---|---|
AdvocateFactory |
This factory will provide adapted advocates when required.
|
FastaIndex |
This class contains the index of a FASTA file.
|
Identification |
This class contains identification results.
|
IdentificationDB |
This class uses a database to manage identification matches.
|
IdentificationMatch |
This is an abstract class for an identification match.
|
IdentificationMethod |
This class will contain all methods used to obtain identifications.
|
NeutralLossesMap |
This class contains the informations relative to the accounting of neutral
losses
|
PeptideAssumption |
This object will models the assumption made by an advocate.
|
SearchParameters |
This class groups the parameters used for identification.
|
SequenceFactory |
Factory retrieving the information of the loaded FASTA file.
|
SpectrumAnnotator |
The spectrum annotator annotates peaks in a spectrum.
|
Enum | Description |
---|---|
IdentificationMatch.MatchType |
The type of match.
|
SearchParameters.PrecursorAccuracyType |
Possible mass accuracy types.
|
Copyright © 2013. All Rights Reserved.