Package | Description |
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com.compomics.util.experiment.quantification |
This package contains experiment classes related to quantification.
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com.compomics.util.experiment.quantification.matches |
Modifier and Type | Field and Description |
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protected java.util.HashMap<java.lang.Integer,Ratio> |
QuantificationMatch.ratios
The estimated ratios.
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Modifier and Type | Method and Description |
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java.util.HashMap<java.lang.Integer,Ratio> |
QuantificationMatch.getRatios()
Getter for the peptide ratios.
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Modifier and Type | Method and Description |
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void |
QuantificationMatch.addRatio(java.lang.Integer reporterIon,
Ratio ratio)
Adds a new ratio to the ratio map.
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Modifier and Type | Method and Description |
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void |
QuantificationMatch.setRatios(java.util.HashMap<java.lang.Integer,Ratio> ratios)
Sets new peptide ratios.
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Constructor and Description |
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PeptideQuantification(java.lang.String peptideKey,
java.util.ArrayList<java.lang.String> psmQuantification,
java.util.HashMap<java.lang.Integer,Ratio> ratios)
Constructor for the peptide quantification
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ProteinQuantification(java.lang.String proteinKey,
java.util.ArrayList<java.lang.String> peptideQuantification,
java.util.HashMap<java.lang.Integer,Ratio> proteinRatios)
Constructor for the protein quantification
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