public class PdbBlock
extends java.lang.Object
Constructor and Description |
---|
PdbBlock(java.lang.String aBlock,
int aStart_protein,
int aEnd_protein,
int aStart_block,
int aEnd_block) |
Modifier and Type | Method and Description |
---|---|
java.lang.String |
getBlock() |
java.lang.String |
getBlockSequence(java.lang.String aPdbAccession) |
int |
getDifference() |
int |
getEnd_block() |
int |
getEnd_protein() |
java.lang.Integer[] |
getSelectedPositions() |
boolean |
getSelection() |
int |
getStart_block() |
int |
getStart_protein() |
java.lang.String |
readFasta(java.lang.String lFasta,
java.lang.String aPdbAccession) |
java.lang.String |
readUrl(java.lang.String aUrl,
java.lang.String aPdbAccession) |
void |
setBlock(java.lang.String aBlock) |
void |
setEnd_block(int aEnd_block) |
void |
setEnd_protein(int aEnd_protein) |
void |
setSelectedPositions(java.lang.Integer[] aSelectedPositions) |
void |
setStart_block(int aStart_block) |
void |
setStart_protein(int aStart_protein) |
public PdbBlock(java.lang.String aBlock, int aStart_protein, int aEnd_protein, int aStart_block, int aEnd_block)
public java.lang.String getBlock()
public void setBlock(java.lang.String aBlock)
public int getStart_protein()
public void setStart_protein(int aStart_protein)
public int getEnd_protein()
public void setEnd_protein(int aEnd_protein)
public int getStart_block()
public void setStart_block(int aStart_block)
public int getEnd_block()
public void setEnd_block(int aEnd_block)
public int getDifference()
public boolean getSelection()
public java.lang.Integer[] getSelectedPositions()
public void setSelectedPositions(java.lang.Integer[] aSelectedPositions)
public java.lang.String getBlockSequence(java.lang.String aPdbAccession)
public java.lang.String readUrl(java.lang.String aUrl, java.lang.String aPdbAccession)
public java.lang.String readFasta(java.lang.String lFasta, java.lang.String aPdbAccession)
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