Package | Description |
---|---|
com.compomics.util.experiment.biology |
This package contains experiement classes related to biological entities.
|
com.compomics.util.experiment.identification |
This package contains experiment classes related to identifications.
|
com.compomics.util.general |
The classes in this package focus mainly on very general,
top-level tasks that are used throughout the other packages
in the util section.
|
com.compomics.util.gui.spectrum |
This package contains GUI classes related to Spectrum and Chromatogram visualization.
|
com.compomics.util.io |
This package contains classes related to input/output.
|
com.compomics.util.nucleotide |
The classes in this package concern useful Objects and their
operations for modelling and handling nucleotides.
|
com.compomics.util.protein |
The classes in this package concern useful Objects and their
operations for modelling and handling proteins.
|
Class and Description |
---|
Header.DatabaseType
A list of the database types.
|
Class and Description |
---|
Header
This class represents the header for a Protein instance.
|
Class and Description |
---|
MolecularFormula
This class represents the molecular formula.
|
Class and Description |
---|
AASequenceImpl
This class represents a sequence for a protein or peptide.
|
Class and Description |
---|
Enzyme
This class implements the functionality for an Enzyme.
|
Class and Description |
---|
AASequenceImpl
This class represents a sequence for a protein or peptide.
|
Header
This class represents the header for a Protein instance.
|
Protein
This class implements the behaviour for a Protein instance.
|
Class and Description |
---|
AASequenceImpl
This class represents a sequence for a protein or peptide.
|
Enzyme
This class implements the functionality for an Enzyme.
|
Header
This class represents the header for a Protein instance.
|
Header.DatabaseType
A list of the database types.
|
ModificationTemplate
This class holds a template for a Modification, meaning that it contains all shared characteristics of
a Modification, but not the instance-specific one.
|
MolecularFormula
This class represents the molecular formula.
|
Protein
This class implements the behaviour for a Protein instance.
|
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