public class CombFilter extends SpectrumFilter
name
Constructor and Description |
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CombFilter(java.util.ArrayList<java.lang.Double> mzComb,
double mzTolerance,
boolean isPpm,
double intensityQuartile)
Constructor.
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Modifier and Type | Method and Description |
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java.lang.String |
getDescription()
Returns a description of the validated spectra, typically "containing a
peak at m/z 114".
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boolean |
validateSpectrum(MSnSpectrum spectrum)
Returns a boolean indicating whether the filter m/z comb was found in the
spectrum.
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getElementaryFilters, getFilter, getName, setName
public CombFilter(java.util.ArrayList<java.lang.Double> mzComb, double mzTolerance, boolean isPpm, double intensityQuartile)
mzComb
- the m/z comb to look formzTolerance
- the m/z toleranceisPpm
- a boolean indicating whether the m/z tolerance is in ppmintensityQuartile
- the intensity quantile to look intopublic boolean validateSpectrum(MSnSpectrum spectrum)
validateSpectrum
in class SpectrumFilter
spectrum
- the spectrum to inspectpublic java.lang.String getDescription()
SpectrumFilter
getDescription
in class SpectrumFilter
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