public class CompomicsWrapper
extends java.lang.Object
Constructor and Description |
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CompomicsWrapper()
Constructor.
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Modifier and Type | Method and Description |
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static void |
checkForNewVersion(java.lang.String currentVersion,
java.lang.String toolName,
java.lang.String googleCodeToolName)
Check if a newer version of the tool is available on GoogleCode, and
closes the tool if the user decided to upgrade.
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static void |
checkForNewVersion(java.lang.String currentVersion,
java.lang.String toolName,
java.lang.String googleCodeToolName,
boolean closeToolWhenUpgrading,
java.lang.String zipFileTag,
java.lang.String zipFileType)
Check if a newer version of the tool is available on GoogleCode.
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static java.lang.String |
getJarFilePath(java.lang.String classPath,
java.lang.String toolName)
Returns the path to the jar file.
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java.util.ArrayList<java.lang.String> |
getJavaHomeAndOptions(java.lang.String toolPath)
Returns an array list containing the Java home plus any parameters to the
JVM.
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void |
launchTool(java.lang.String toolName,
java.io.File jarFile,
java.lang.String splashName,
java.lang.String mainClass)
Starts the launcher by calling the launch method.
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void |
launchTool(java.lang.String toolName,
java.io.File jarFile,
java.lang.String splashName,
java.lang.String mainClass,
java.lang.String[] args)
Starts the launcher by calling the launch method.
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public void launchTool(java.lang.String toolName, java.io.File jarFile, java.lang.String splashName, java.lang.String mainClass)
toolName
- jarFile
- the jar file to executesplashName
- the splash name, for example peptide-shaker-splash.pngmainClass
- the main class to execute, for example
eu.isas.peptideshaker.gui.PeptideShakerGUIpublic void launchTool(java.lang.String toolName, java.io.File jarFile, java.lang.String splashName, java.lang.String mainClass, java.lang.String[] args)
toolName
- jarFile
- the jar file to executesplashName
- the splash name, for example peptide-shaker-splash.png,
can be nullmainClass
- the main class to execute, for example
eu.isas.peptideshaker.gui.PeptideShakerGUIargs
- the arguments to pass to the tool (ignored if null)public static java.lang.String getJarFilePath(java.lang.String classPath, java.lang.String toolName)
classPath
- the class path to extract the jar file path fromtoolName
- the name of the tool, e.g., "PeptideShaker" or
"SearchGUI".public static void checkForNewVersion(java.lang.String currentVersion, java.lang.String toolName, java.lang.String googleCodeToolName)
currentVersion
- the version number of the tool currently runningtoolName
- the name of the tool, e.g., "PeptideShaker"googleCodeToolName
- the GoogleCode name of the tool, e.g.,
"peptide-shaker"public static void checkForNewVersion(java.lang.String currentVersion, java.lang.String toolName, java.lang.String googleCodeToolName, boolean closeToolWhenUpgrading, java.lang.String zipFileTag, java.lang.String zipFileType)
currentVersion
- the version number of the tool currently runningtoolName
- the name of the tool, e.g., "PeptideShaker"googleCodeToolName
- the GoogleCode name of the tool, e.g.,
"peptide-shaker"closeToolWhenUpgrading
- if true, the tool will close when the
download page is opened, false only opens the download pagezipFileTag
- the zip file tag, e.g., SearchGUI-1.10.4_windows.zip
has the tag "_windows"zipFileType
- the zip file type, e.g., ".zip" or ".tar.gz"public java.util.ArrayList<java.lang.String> getJavaHomeAndOptions(java.lang.String toolPath) throws java.io.FileNotFoundException, java.io.IOException, java.lang.ClassNotFoundException
toolPath
- the path to the jar file of the tooljava.io.FileNotFoundException
java.io.IOException
java.lang.ClassNotFoundException
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