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java.lang.Objectcom.compomics.util.experiment.personalization.ExperimentObject
com.compomics.util.experiment.identification.advocates.SearchEngine
public class SearchEngine
This class models a search engine. For now only Mascot, OMSSA and X!Tandem are implemented.
Field Summary |
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Fields inherited from interface com.compomics.util.experiment.identification.Advocate |
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ANDROMEDA, MASCOT, OMSSA, PEPNOVO, PEPTIDE_SHAKER, PEPTIZER, XTANDEM |
Constructor Summary | |
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SearchEngine()
Constructor for a search engine. |
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SearchEngine(int searchEngineId)
Constructor for a search engine. |
Method Summary | |
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int |
getId()
Getter for the search engine index. |
String |
getName()
Getter for the search engine name. |
static String |
getName(int id)
Getter for the search engine name. |
static boolean |
isAscendingScore(int id)
Indicates whether a search engine score is increasing when the quality of the match increases. |
Methods inherited from class com.compomics.util.experiment.personalization.ExperimentObject |
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addUrParam, getParameterKey, getUrParam |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public SearchEngine()
public SearchEngine(int searchEngineId)
searchEngineId
- the search engine indexMethod Detail |
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public static String getName(int id)
id
- the id of the search engine
public String getName()
getName
in interface Advocate
public int getId()
getId
in interface Advocate
public static boolean isAscendingScore(int id)
id
- the index of the search engine according to the Advocate static
fields
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