com.compomics.util.experiment
Class SampleAnalysisSet

java.lang.Object
  extended by com.compomics.util.experiment.personalization.ExperimentObject
      extended by com.compomics.util.experiment.SampleAnalysisSet
All Implemented Interfaces:
Serializable, Cloneable

public class SampleAnalysisSet
extends ExperimentObject

A sample measurement set is a set of replicates from a common sample. User: Marc Date: Sep 1, 2010 Time: 10:05:53 AM

See Also:
Serialized Form

Constructor Summary
SampleAnalysisSet(Sample referenceSample, ArrayList<ProteomicAnalysis> replicates)
          Contructor for a set of analysis of a sample
SampleAnalysisSet(Sample referenceSample, ProteomicAnalysis replicate)
          Contructor for an analysis of a sample without replicates
 
Method Summary
 ProteomicAnalysis getProteomicAnalysis(int replicateNumber)
          Returns the analysis corresponding to the selected replicate
 ArrayList<Integer> getReplicateNumberList()
          Returns a list containing replicate numbers
 
Methods inherited from class com.compomics.util.experiment.personalization.ExperimentObject
addUrParam, getParameterKey, getUrParam
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

SampleAnalysisSet

public SampleAnalysisSet(Sample referenceSample,
                         ProteomicAnalysis replicate)
Contructor for an analysis of a sample without replicates

Parameters:
referenceSample - the reference sample
replicate - the analysis for this sample

SampleAnalysisSet

public SampleAnalysisSet(Sample referenceSample,
                         ArrayList<ProteomicAnalysis> replicates)
Contructor for a set of analysis of a sample

Parameters:
referenceSample - the reference sample
replicates - the set of replicates for this sample
Method Detail

getProteomicAnalysis

public ProteomicAnalysis getProteomicAnalysis(int replicateNumber)
Returns the analysis corresponding to the selected replicate

Parameters:
replicateNumber - index of the replicate analyzed
Returns:
the proteomic analysis of the replicate

getReplicateNumberList

public ArrayList<Integer> getReplicateNumberList()
Returns a list containing replicate numbers

Returns:
a list containing replicate numbers


Copyright © 2013. All Rights Reserved.