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Packages that use SpectrumAnnotator | |
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com.compomics.util.experiment.identification.ptm.ptmscores |
Uses of SpectrumAnnotator in com.compomics.util.experiment.identification.ptm.ptmscores |
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Methods in com.compomics.util.experiment.identification.ptm.ptmscores with parameters of type SpectrumAnnotator | |
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static HashMap<Integer,HashMap<Integer,Double>> |
AScore.getPositionToScoreMap(Peptide peptide,
Peptide noModPeptide,
ArrayList<Integer> possibleSites,
MSnSpectrum spectrum,
HashMap<Integer,MSnSpectrum> spectrumMap,
HashMap<Ion.IonType,ArrayList<Integer>> iontypes,
NeutralLossesMap scoringLossesMap,
ArrayList<Integer> charges,
int precursorCharge,
double mzTolerance,
SpectrumAnnotator spectrumAnnotator,
PTM refPTM)
Returns a map PTM localization -> score. |
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