public class MascotEnzymeReader
extends java.lang.Object
Constructor and Description |
---|
MascotEnzymeReader(java.io.InputStream aEnzymeStream)
The constructor allows you specify to specify an inputstream from which to load
the enzyme information.
|
MascotEnzymeReader(java.lang.String aEnzymeFile)
The constructor requires that you specify the file from which to load
the enzyme information.
|
Modifier and Type | Method and Description |
---|---|
Enzyme |
getEnzyme(java.lang.String aTitle)
This method will return a copy of an Enzyme instance
for the given name, or 'null' if the enzyme was not found in the current list.
|
java.lang.String[] |
getEnzymeNames()
This method reports on all the known names for enzymes in this reader.
|
public MascotEnzymeReader(java.lang.String aEnzymeFile) throws java.io.IOException
aEnzymeFile
- String with the filename of the mascot enzyme file.java.io.IOException
- when the enzyme file could not be read.public MascotEnzymeReader(java.io.InputStream aEnzymeStream) throws java.io.IOException
aEnzymeStream
- InputStream to the mascot enzyme file.java.io.IOException
- when the enzyme file could not be read.public java.lang.String[] getEnzymeNames()
public Enzyme getEnzyme(java.lang.String aTitle)
aTitle
- String with the title (name) of the Enzyme to retrieve.Copyright © 2013. All Rights Reserved.