Uses of Class
com.compomics.util.experiment.quantification.Ratio

Packages that use Ratio
com.compomics.util.experiment.quantification.reporterion.quantification This package contains experiment classes related to quantification by reporter ions. 
 

Uses of Ratio in com.compomics.util.experiment.quantification.reporterion.quantification
 

Methods in com.compomics.util.experiment.quantification.reporterion.quantification that return types with arguments of type Ratio
 HashMap<Integer,Ratio> ProteinQuantification.getProteinRatios()
          Getter for the ratios
 HashMap<Integer,Ratio> PsmQuantification.getRatios()
          Getter for the estimated ratio
 HashMap<Integer,Ratio> PeptideQuantification.getRatios()
          Getter for the peptide ratios
 

Methods in com.compomics.util.experiment.quantification.reporterion.quantification with parameters of type Ratio
 void PsmQuantification.addRatio(int reporterIndex, Ratio ratio)
          Method to add an estimated ratio
 

Method parameters in com.compomics.util.experiment.quantification.reporterion.quantification with type arguments of type Ratio
 void PeptideQuantification.setPeptideRatios(HashMap<Integer,Ratio> ratios)
          sets new peptide ratios
 void ProteinQuantification.setProteinRatios(HashMap<Integer,Ratio> ratios)
          sets new protein ratios
 

Constructor parameters in com.compomics.util.experiment.quantification.reporterion.quantification with type arguments of type Ratio
PeptideQuantification(String peptideKey, HashMap<String,PsmQuantification> psmQuantification, HashMap<Integer,Ratio> ratios)
          Constructor for the peptide quantification
ProteinQuantification(String proteinKey, HashMap<String,PeptideQuantification> peptideQuantification, HashMap<Integer,Ratio> proteinRatios)
          Constructor for the protein quantification
 



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