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Packages that use FastaIndex | |
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com.compomics.util.experiment.identification | This package contains experiment classes related to identifications. |
Uses of FastaIndex in com.compomics.util.experiment.identification |
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Methods in com.compomics.util.experiment.identification that return FastaIndex | |
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static FastaIndex |
SequenceFactory.createFastaIndex(File fastaFile)
static method to create a fasta index for a fasta file |
static FastaIndex |
SequenceFactory.createFastaIndex(File fastaFile,
ProgressDialogX progressDialog)
static method to create a fasta index for a fasta file |
FastaIndex |
SequenceFactory.getFastaIndex(File fastaFile)
Returns the file index of a fasta file |
FastaIndex |
SequenceFactory.getFastaIndex(File fastaFile,
ProgressDialogX progressDialog)
Returns the file index of a fasta file |
FastaIndex |
SequenceFactory.getIndex(File fastaIndex)
Deserializes the index of the fasta file |
Methods in com.compomics.util.experiment.identification with parameters of type FastaIndex | |
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void |
SequenceFactory.writeIndex(FastaIndex fastaIndex,
File directory)
serializes the fasta file index in a given directory |
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