Uses of Interface
com.compomics.util.interfaces.Modification

Packages that use Modification
com.compomics.util.protein The classes in this package concern useful Objects and their operations for modelling and handling proteins. 
 

Uses of Modification in com.compomics.util.protein
 

Classes in com.compomics.util.protein that implement Modification
 class ModificationImplementation
          This class implements a specific Modification.
 

Methods in com.compomics.util.protein that return Modification
static Modification ModificationFactory.getModification(String aTitle, int aLocation)
          This method will return a Modification instance from a title.
static Modification ModificationFactory.getModification(String aCode, String aResidue, int aLocation)
          This method takes a code and a residue (the residue for the N-terminus is NTERMINUS and for the C-terminus CTERMINUS!) and converts this into a Modification instance if possible.
 

Methods in com.compomics.util.protein with parameters of type Modification
 void AASequenceImpl.addModification(Modification aModification)
          This method adds a modification to the list of modifications.
 



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