Uses of Class
com.compomics.util.experiment.identification.FastaIndex

Packages that use FastaIndex
com.compomics.util.experiment.identification This package contains experiment classes related to identifications. 
 

Uses of FastaIndex in com.compomics.util.experiment.identification
 

Methods in com.compomics.util.experiment.identification that return FastaIndex
static FastaIndex SequenceFactory.createFastaIndex(java.io.File fastaFile)
          static method to create a fasta index for a fasta file
static FastaIndex SequenceFactory.createFastaIndex(java.io.File fastaFile, ProgressDialogX progressDialog)
          static method to create a fasta index for a fasta file
 FastaIndex SequenceFactory.getFastaIndex(java.io.File fastaFile)
          Returns the file index of a fasta file
 FastaIndex SequenceFactory.getFastaIndex(java.io.File fastaFile, ProgressDialogX progressDialog)
          Returns the file index of a fasta file
 FastaIndex SequenceFactory.getIndex(java.io.File fastaIndex)
          Deserializes the index of the fasta file
 

Methods in com.compomics.util.experiment.identification with parameters of type FastaIndex
 void SequenceFactory.writeIndex(FastaIndex fastaIndex, java.io.File directory)
          serializes the fasta file index in a given directory
 



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