Package | Description |
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com.compomics.util.experiment.identification.matches |
This package contains experiment classes releated to matches.
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com.compomics.util.preferences |
Modifier and Type | Method and Description |
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PeptideAssumption |
SpectrumMatch.getBestPeptideAssumption()
Getter for the best peptide assumption.
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Modifier and Type | Method and Description |
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void |
SpectrumMatch.setBestPeptideAssumption(PeptideAssumption bestAssumption)
Setter for the best peptide assumption.
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Modifier and Type | Method and Description |
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boolean |
IdFilter.validatePeptideAssumption(PeptideAssumption assumption)
Validates the peptide assumption based on the peptide length and maximal
e-values allowed.
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boolean |
IdFilter.validatePrecursor(PeptideAssumption assumption,
String spectrumKey,
SpectrumFactory spectrumFactory)
Validates the mass deviation of a peptide assumption.
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