public class ProteinAnnotation extends Object
Constructor and Description |
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ProteinAnnotation() |
Modifier and Type | Method and Description |
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void |
annotateProteinGroupsWithAccessions()
Indicates whether the proteins found are loaded in the sequence factory
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void |
annotateProteinGroupsWithGenes()
Adds gene information to the protein report
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void |
loadDb() |
void |
loadGene() |
static void |
main(String[] args) |
public static void main(String[] args)
public void loadDb() throws IOException, FileNotFoundException, ClassNotFoundException
public void loadGene() throws IOException, FileNotFoundException, ClassNotFoundException
public void annotateProteinGroupsWithAccessions() throws FileNotFoundException, IOException, InterruptedException, ClassNotFoundException
public void annotateProteinGroupsWithGenes() throws FileNotFoundException, IOException, InterruptedException, ClassNotFoundException
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