Package com.compomics.util.gui.spectrum

This package contains GUI classes related to Spectrum and Chromatogram visualization.

See:
          Description

Class Summary
ChromatogramPanel This class provides a JPanel that can display a chromatogram.
DefaultSpectrumAnnotation This class provideds a default implementation of the SpectrumAnnotation interface.
FragmentIonTable Creates a fragment ion table with the detected fragment ions.
GraphicsPanel This class presents a JPanel that will hold and display a mass spectrum in centroid or profile mode, or a chromatogram.
IntensityHistogram Creates an IntensityHistogram plot.
IsotopicDistributionPanel This class provides a JPanel that can display a peptide isotopic distribution.
MassErrorBubblePlot Creates a MassErrorBubblePlot displaying the mz values vs the mass error with the intensity as the size of the bubbles.
MassErrorPlot Creates a MassErrorPlot displaying the mz values vs the mass error.
ReferenceArea A reference area to be added to a GraphicsPanel.
SequenceFragmentationPanel This class was imported from the Peptizer and MascotDatfile parser, and was developed to display fragmentation information on the modified sequence as inspired by X!
SpectrumPanel This class presents a JPanel that will hold and display a mass spectrum in centroid or profile mode.
 

Enum Summary
GraphicsPanel.GraphicsPanelType An enumerator of the possible GraphicsPanel types
 

Package com.compomics.util.gui.spectrum Description

This package contains GUI classes related to Spectrum and Chromatogram visualization.



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