Uses of Class
com.compomics.util.experiment.quantification.Ratio

Packages that use Ratio
com.compomics.util.experiment.quantification.reporterion This package contains experiment classes related to reporter ions. 
com.compomics.util.experiment.quantification.reporterion.quantification This package contains experiment classes related to quantification by reporter ions. 
 

Uses of Ratio in com.compomics.util.experiment.quantification.reporterion
 

Fields in com.compomics.util.experiment.quantification.reporterion with type parameters of type Ratio
protected  java.util.HashMap<java.lang.Integer,Ratio> QuantificationMatch.ratios
          The estimated ratios
 

Methods in com.compomics.util.experiment.quantification.reporterion that return types with arguments of type Ratio
 java.util.HashMap<java.lang.Integer,Ratio> QuantificationMatch.getRatios()
          Getter for the peptide ratios
 

Methods in com.compomics.util.experiment.quantification.reporterion with parameters of type Ratio
 void QuantificationMatch.addRatio(java.lang.Integer reporterIon, Ratio ratio)
          Adds a new ratio to the ratio map.
 

Method parameters in com.compomics.util.experiment.quantification.reporterion with type arguments of type Ratio
 void QuantificationMatch.setRatios(java.util.HashMap<java.lang.Integer,Ratio> ratios)
          sets new peptide ratios
 

Uses of Ratio in com.compomics.util.experiment.quantification.reporterion.quantification
 

Constructor parameters in com.compomics.util.experiment.quantification.reporterion.quantification with type arguments of type Ratio
PeptideQuantification(java.lang.String peptideKey, java.util.ArrayList<java.lang.String> psmQuantification, java.util.HashMap<java.lang.Integer,Ratio> ratios)
          Constructor for the peptide quantification
ProteinQuantification(java.lang.String proteinKey, java.util.ArrayList<java.lang.String> peptideQuantification, java.util.HashMap<java.lang.Integer,Ratio> proteinRatios)
          Constructor for the protein quantification
 



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