Package com.compomics.util.experiment.biology

This package contains experiement classes related to biological entities.

See:
          Description

Class Summary
AminoAcid Class representing amino acids
Atom This interface contains information about atoms
Enzyme This class models an enzyme.
EnzymeFactory This factory will provide the implemented enzymes.
FragmentFactory This factory generates the expected fragment ions from a peptide sequence.
GlyconFactory This factory will provide theoretic glycons.
Ion This class models an ion.
NeutralLoss This class represents a neutral loss.
Peptide This class models a peptide.
Protein This class models a protein.
PTM This class models a post-translational modification.
PTMFactory This factory will load PTM from an XML file and provide them on demand as standard class.
Sample This class models a proteomic sample.
 

Package com.compomics.util.experiment.biology Description

This package contains experiement classes related to biological entities.



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