com.compomics.util.experiment.identification
Class IdentificationMethod

java.lang.Object
  extended by com.compomics.util.experiment.personalization.ExperimentObject
      extended by com.compomics.util.experiment.identification.IdentificationMethod
All Implemented Interfaces:
java.io.Serializable, java.lang.Cloneable

public class IdentificationMethod
extends ExperimentObject

This class will contain all methods used to obtain identifications. User: Marc Date: Nov 11, 2010 Time: 3:56:49 PM

See Also:
Serialized Form

Field Summary
static int MS2_IDENTIFICATION
          index for identification method based on MS2 fragment ion matching
static int PEPTIDE_FINGERPRINTING
          index for identification method based on peptide mass fingerprinting
 
Constructor Summary
IdentificationMethod(int index)
          Constructor for the identification method
 
Method Summary
 int getIndex()
          returns the index of the identification method
 
Methods inherited from class com.compomics.util.experiment.personalization.ExperimentObject
addUrParam, getParameterKey, getUrParam
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

PEPTIDE_FINGERPRINTING

public static final int PEPTIDE_FINGERPRINTING
index for identification method based on peptide mass fingerprinting

See Also:
Constant Field Values

MS2_IDENTIFICATION

public static final int MS2_IDENTIFICATION
index for identification method based on MS2 fragment ion matching

See Also:
Constant Field Values
Constructor Detail

IdentificationMethod

public IdentificationMethod(int index)
Constructor for the identification method

Parameters:
index - the index of the method as indexed by the static fields
Method Detail

getIndex

public int getIndex()
returns the index of the identification method

Returns:
the index of the identification method


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