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Deprecated Methods | |
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com.compomics.util.gui.spectrum.SpectrumPanel.determineColorOfPeak(String)
it is advised to use methods based on the ion type rather than on the peak label |
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com.compomics.util.gui.spectrum.SpectrumPanel.determineFragmentIonColor(String)
use the method based on the Ion class instead |
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com.compomics.util.gui.dialogs.ProgressDialogX.doNothingOnClose()
replace by setUnstoppable |
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com.compomics.util.gui.spectrum.SpectrumPanel.filterAnnotations(Vector don't use method based on the peak labels but on the data type |
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com.compomics.util.experiment.identification.matches.IonMatch.getError()
replaced by getAbsoluteError() and getRelativeError() |
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com.compomics.util.gui.dialogs.ProgressDialogX.setIntermidiate(boolean)
Replaced by setIndeterminate, from utilities 3.1.17. |
Deprecated Constructors | |
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com.compomics.util.gui.spectrum.SequenceFragmentationPanel(String, ArrayList use the panel with ion selection instead |
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