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Packages that use Identification | |
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com.compomics.util.experiment | This package contains MSExperiment main class and all sub-classes useful for the modeling of an experiment. |
com.compomics.util.experiment.identification.identifications | This package contains experiment classes related to MS/MS identifications. |
com.compomics.util.experiment.quantification | This package contains experiment classes related to quantification. |
Uses of Identification in com.compomics.util.experiment |
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Methods in com.compomics.util.experiment that return Identification | |
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Identification |
ProteomicAnalysis.getIdentification(int identificationMethod)
Returns identification results obtained with an identification method |
Methods in com.compomics.util.experiment with parameters of type Identification | |
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void |
ProteomicAnalysis.addIdentificationResults(int identificationMethod,
Identification identificationResults)
Adds identification results obtained with an identification method |
Uses of Identification in com.compomics.util.experiment.identification.identifications |
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Subclasses of Identification in com.compomics.util.experiment.identification.identifications | |
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class |
Ms2Identification
This class models an Ms2 Identification. |
Uses of Identification in com.compomics.util.experiment.quantification |
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Methods in com.compomics.util.experiment.quantification with parameters of type Identification | |
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void |
Quantification.buildPeptidesAndProteinQuantifications(Identification identification)
Creates the peptides and protein quantification instances based on the identification and the psm quantification. |
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