Package | Description |
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com.compomics.util.experiment.biology |
Experiment classes related to biological entities.
|
com.compomics.util.experiment.identification |
Experiment classes related to identifications.
|
com.compomics.util.general |
General, top-level tasks that are used throughout the other packages in the util section.
|
com.compomics.util.gui.spectrum |
Spectrum and Chromatogram visualization GUI classes.
|
com.compomics.util.io |
Classes related to input/output.
|
com.compomics.util.nucleotide |
Useful objects for modeling and handling nucleotides.
|
com.compomics.util.protein |
Classes concerning useful Objects and their operations for modeling and handling proteins.
|
Class and Description |
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Header.DatabaseType
A list of the database types.
|
Class and Description |
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Header
This class represents the header for a Protein instance.
|
Header.DatabaseType
A list of the database types.
|
Class and Description |
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MolecularFormula
This class represents the molecular formula.
|
Class and Description |
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AASequenceImpl
This class represents a sequence for a protein or peptide.
|
Class and Description |
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Enzyme
This class implements the functionality for an Enzyme.
|
Class and Description |
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AASequenceImpl
This class represents a sequence for a protein or peptide.
|
Header
This class represents the header for a Protein instance.
|
Protein
This class implements the behaviour for a Protein instance.
|
Class and Description |
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AASequenceImpl
This class represents a sequence for a protein or peptide.
|
Enzyme
This class implements the functionality for an Enzyme.
|
Header
This class represents the header for a Protein instance.
|
Header.DatabaseType
A list of the database types.
|
ModificationTemplate
This class holds a template for a Modification, meaning that it contains all shared characteristics of
a Modification, but not the instance-specific one.
|
MolecularFormula
This class represents the molecular formula.
|
Protein
This class implements the behaviour for a Protein instance.
|
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