All Classes
Packages
com.compomics.software
com.compomics.software.autoupdater
com.compomics.software.dialogs
com.compomics.software.settings
com.compomics.software.settings.gui
com.compomics.util
com.compomics.util.db
com.compomics.util.db.components
com.compomics.util.db.interfaces
com.compomics.util.enumeration
com.compomics.util.examples
com.compomics.util.exceptions
com.compomics.util.exceptions.exception_handlers
com.compomics.util.experiment
com.compomics.util.experiment.annotation.gene
com.compomics.util.experiment.annotation.go
com.compomics.util.experiment.biology
com.compomics.util.experiment.biology.aminoacids
com.compomics.util.experiment.biology.atoms
com.compomics.util.experiment.biology.ions
com.compomics.util.experiment.filtering
com.compomics.util.experiment.identification
com.compomics.util.experiment.identification.identification_parameters
com.compomics.util.experiment.identification.identifications
com.compomics.util.experiment.identification.matches
com.compomics.util.experiment.identification.matches_iterators
com.compomics.util.experiment.identification.protein_inference.proteintree
com.compomics.util.experiment.identification.psm_scoring
com.compomics.util.experiment.identification.psm_scoring.psm_scores
com.compomics.util.experiment.identification.ptm
com.compomics.util.experiment.identification.ptm.ptmscores
com.compomics.util.experiment.identification.search_parameters_cli
com.compomics.util.experiment.identification.spectrum_annotators
com.compomics.util.experiment.identification.tags
com.compomics.util.experiment.identification.tags.matchers
com.compomics.util.experiment.identification.tags.tagcomponents
com.compomics.util.experiment.io
com.compomics.util.experiment.io.identifications
com.compomics.util.experiment.io.identifications.idfilereaders
com.compomics.util.experiment.io.massspectrometry
com.compomics.util.experiment.io.massspectrometry.export
com.compomics.util.experiment.massspectrometry
com.compomics.util.experiment.patient
com.compomics.util.experiment.personalization
com.compomics.util.experiment.quantification
com.compomics.util.experiment.quantification.reporterion
com.compomics.util.experiment.quantification.spectrumcounting
com.compomics.util.experiment.refinementparameters
com.compomics.util.experiment.units
com.compomics.util.general
com.compomics.util.general.servlet
com.compomics.util.gui
com.compomics.util.gui.error_handlers
com.compomics.util.gui.error_handlers.notification
com.compomics.util.gui.events
com.compomics.util.gui.export.graphics
com.compomics.util.gui.export.report
com.compomics.util.gui.filehandling
com.compomics.util.gui.gene_mapping
com.compomics.util.gui.interfaces
com.compomics.util.gui.isotopic_calculator
com.compomics.util.gui.protein
com.compomics.util.gui.ptm
com.compomics.util.gui.renderers
com.compomics.util.gui.searchsettings
com.compomics.util.gui.searchsettings.algorithm_settings
com.compomics.util.gui.spectrum
com.compomics.util.gui.tablemodels
com.compomics.util.gui.utils
com.compomics.util.gui.waiting.waitinghandlers
com.compomics.util.interfaces
com.compomics.util.io
com.compomics.util.io.compression
com.compomics.util.io.export
com.compomics.util.io.export.styles
com.compomics.util.io.export.writers
com.compomics.util.io.filefilters
com.compomics.util.junit
com.compomics.util.math
com.compomics.util.math.matrix
com.compomics.util.math.roc
com.compomics.util.math.statistics
com.compomics.util.math.statistics.distributions
com.compomics.util.memory
com.compomics.util.messages
com.compomics.util.nucleotide
com.compomics.util.pdbfinder
com.compomics.util.pdbfinder.das.readers
com.compomics.util.pdbfinder.pdb
com.compomics.util.preferences
com.compomics.util.preferences.gui
com.compomics.util.pride
com.compomics.util.pride.prideobjects
com.compomics.util.pride.validation
com.compomics.util.protein
com.compomics.util.sun
com.compomics.util.waiting