com.compomics.util.experiment.identification.identifications
Class Ms2Identification

java.lang.Object
  extended by com.compomics.util.experiment.personalization.ExperimentObject
      extended by com.compomics.util.experiment.identification.Identification
          extended by com.compomics.util.experiment.identification.identifications.Ms2Identification
All Implemented Interfaces:
Serializable, Cloneable

public class Ms2Identification
extends Identification

This class models an Ms2 Identification. User: Marc Date: Nov 11, 2010 Time: 4:40:47 PM

See Also:
Serialized Form

Field Summary
 
Fields inherited from class com.compomics.util.experiment.identification.Identification
automatedMemoryManagement, cacheSize, EXTENTION, inMemory, loadedMatches, loadedMatchesMap, longKeys, methodUsed, modifiedMatches, peptideIdentification, proteinIdentification, proteinMap, serializationDirectory, spectrumIdentification, urParameters
 
Constructor Summary
Ms2Identification()
          constructor for MS2 identification
 
Method Summary
 
Methods inherited from class com.compomics.util.experiment.identification.Identification
addMatchParameter, addPeptideMatchParameter, addProteinMatchParameter, addSpectrumMatch, addSpectrumMatch, addSpectrumMatchParameter, buildPeptidesAndProteins, buildPeptidesAndProteins, close, convert, emptyCache, establishConnection, getCacheSize, getFileName, getMatchParameter, getMatchType, getMethodUsed, getPeptideIdentification, getPeptideMatch, getPeptideMatchParameter, getProteinIdentification, getProteinMap, getProteinMatch, getProteinMatchPArameter, getSerializationDirectory, getSpectrumIdentification, getSpectrumMatch, getSpectrumMatchParameter, isAutomatedMemoryManagement, isDB, isInMemory, matchExists, memoryCheck, reduceMemoryConsumtion, removeMatch, removePeptideMatch, removeProteinMatch, removeSpectrumMatch, setAutomatedMemoryManagement, setCacheSize, setDirectory, setInMemory, setIsDB, setMatchChanged, updateCache, updatePeptideMatchParameter, updateProteinMatchParameter, updateSpectrumMatchParameter
 
Methods inherited from class com.compomics.util.experiment.personalization.ExperimentObject
addUrParam, getParameterKey, getUrParam
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

Ms2Identification

public Ms2Identification()
constructor for MS2 identification



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