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Packages that use DefaultSpectrumAnnotation | |
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com.compomics.util.experiment.identification | This package contains experiment classes related to identifications. |
com.compomics.util.gui.spectrum | This package contains GUI classes related to Spectrum and Chromatogram visualization. |
Uses of DefaultSpectrumAnnotation in com.compomics.util.experiment.identification |
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Methods in com.compomics.util.experiment.identification that return types with arguments of type DefaultSpectrumAnnotation | |
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static Vector<DefaultSpectrumAnnotation> |
SpectrumAnnotator.getSpectrumAnnotation(ArrayList<IonMatch> ionMatches)
Translates the list of ion matches into a vector of annotations which can be read by the SpectrumPanel. |
Uses of DefaultSpectrumAnnotation in com.compomics.util.gui.spectrum |
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Methods in com.compomics.util.gui.spectrum that return types with arguments of type DefaultSpectrumAnnotation | |
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static Vector<DefaultSpectrumAnnotation> |
SpectrumPanel.filterAnnotations(Vector<DefaultSpectrumAnnotation> annotations,
HashMap<Ion.IonType,ArrayList<Integer>> iontypes,
ArrayList<NeutralLoss> neutralLosses,
boolean singleChargeSelected,
boolean doubleChargeSelected,
boolean moreThanTwoChargesSelected)
Deprecated. don't use method based on the peak labels but on the data type |
Method parameters in com.compomics.util.gui.spectrum with type arguments of type DefaultSpectrumAnnotation | |
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static Vector<DefaultSpectrumAnnotation> |
SpectrumPanel.filterAnnotations(Vector<DefaultSpectrumAnnotation> annotations,
HashMap<Ion.IonType,ArrayList<Integer>> iontypes,
ArrayList<NeutralLoss> neutralLosses,
boolean singleChargeSelected,
boolean doubleChargeSelected,
boolean moreThanTwoChargesSelected)
Deprecated. don't use method based on the peak labels but on the data type |
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