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Packages that use ProgressDialogX | |
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com.compomics.util | This package contains general util classes. |
com.compomics.util.db | This package contains database related classes. |
com.compomics.util.experiment.identification | This package contains experiment classes related to identifications. |
Uses of ProgressDialogX in com.compomics.util |
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Methods in com.compomics.util with parameters of type ProgressDialogX | |
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static void |
Util.tableToFile(JTable table,
String separator,
ProgressDialogX progressDialog,
boolean removeHtml,
BufferedWriter writer)
Writes the table to a file as separated text. |
static String |
Util.tableToText(JTable table,
String separator,
ProgressDialogX progressDialog,
boolean removeHtml)
Returns the table as a separated text file. |
Uses of ProgressDialogX in com.compomics.util.db |
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Methods in com.compomics.util.db with parameters of type ProgressDialogX | |
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void |
ObjectsDB.loadObjects(String tableName,
ArrayList<String> keys,
ProgressDialogX progressDialog)
Loads some objects from a table in the cache. |
void |
ObjectsDB.loadObjects(String tableName,
ProgressDialogX progressDialog)
Loads all objects from a table in the cache. |
Uses of ProgressDialogX in com.compomics.util.experiment.identification |
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Methods in com.compomics.util.experiment.identification with parameters of type ProgressDialogX | |
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void |
Identification.convert(ProgressDialogX progressDialog,
String newDirectory,
String newName,
ObjectsCache objectsCache)
Converts a serlialization based structure into a database based one. |
void |
IdentificationDB.loadPeptideMatches(ArrayList<String> peptideKeys,
ProgressDialogX progressDialog)
Loads the desired peptide matches of the given type in the cache of the database. |
void |
Identification.loadPeptideMatches(ArrayList<String> peptideKeys,
ProgressDialogX progressDialog)
Loads the desired peptide matches of the given type in the cache of the database. |
void |
IdentificationDB.loadPeptideMatches(ProgressDialogX progressDialog)
Loads all peptide matches in the cache of the database. |
void |
Identification.loadPeptideMatches(ProgressDialogX progressDialog)
Loads all peptide matches in the cache of the database. |
void |
IdentificationDB.loadPeptideMatchParameters(ArrayList<String> peptideKeys,
UrParameter urParameter,
ProgressDialogX progressDialog)
Loads the desired peptide match parameters of the given type in the cache of the database. |
void |
Identification.loadPeptideMatchParameters(ArrayList<String> peptideKeys,
UrParameter urParameter,
ProgressDialogX progressDialog)
Loads the desired peptide match parameters of the given type in the cache of the database. |
void |
IdentificationDB.loadPeptideMatchParameters(UrParameter urParameter,
ProgressDialogX progressDialog)
Loads all peptide match parameters of the given type in the cache of the database. |
void |
Identification.loadPeptideMatchParameters(UrParameter urParameter,
ProgressDialogX progressDialog)
Loads all peptide match parameters of the given type in the cache of the database. |
void |
IdentificationDB.loadProteinMatches(ProgressDialogX progressDialog)
Loads all protein matches in the cache of the database. |
void |
Identification.loadProteinMatches(ProgressDialogX progressDialog)
Loads all protein matches in the cache of the database. |
void |
IdentificationDB.loadProteinMatchParameters(UrParameter urParameter,
ProgressDialogX progressDialog)
Loads all protein match parameters of the given type in the cache of the database. |
void |
Identification.loadProteinMatchParameters(UrParameter urParameter,
ProgressDialogX progressDialog)
Loads all protein match parameters of the given type in the cache of the database. |
void |
IdentificationDB.loadSpectrumMatches(ArrayList<String> spectrumKeys,
ProgressDialogX progressDialog)
Loads all given spectrum matches in the cache of the database. |
void |
Identification.loadSpectrumMatches(ArrayList<String> spectrumKeys,
ProgressDialogX progressDialog)
Loads the given spectrum matches in the cache of the database. |
void |
IdentificationDB.loadSpectrumMatches(String fileName,
ProgressDialogX progressDialog)
Loads all spectrum matches of the given file in the cache of the database. |
void |
Identification.loadSpectrumMatches(String fileName,
ProgressDialogX progressDialog)
Loads all spectrum matches of the file in the cache of the database |
void |
IdentificationDB.loadSpectrumMatchParameters(ArrayList<String> spectrumKeys,
UrParameter urParameter,
ProgressDialogX progressDialog)
Loads all desired spectrum match parameters in the cache of the database. |
void |
Identification.loadSpectrumMatchParameters(ArrayList<String> spectrumKeys,
UrParameter urParameter,
ProgressDialogX progressDialog)
Loads all desired spectrum match parameters in the cache of the database. |
void |
IdentificationDB.loadSpectrumMatchParameters(String fileName,
UrParameter urParameter,
ProgressDialogX progressDialog)
Loads all spectrum match parameters of the given type in the cache of the database. |
void |
Identification.loadSpectrumMatchParameters(String fileName,
UrParameter urParameter,
ProgressDialogX progressDialog)
Loads all spectrum match parameters of the given type in the cache of the database |
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