Package | Description |
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com.compomics.util.experiment.biology.modifications |
Modifier and Type | Method and Description |
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ModificationType |
Modification.getModificationType()
Returns the modification type.
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static ModificationType |
ModificationType.valueOf(String name)
Returns the enum constant of this type with the specified name.
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static ModificationType[] |
ModificationType.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
Constructor and Description |
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Modification(ModificationType modificationType,
String name,
Double mass,
ArrayList<String> residues)
Simple constructor for a PTM.
|
Modification(ModificationType modificationType,
String name,
String shortName,
AtomChain atomChainAdded,
AtomChain atomChainRemoved,
AminoAcidPattern aminoAcidPattern)
Constructor for a reference modification.
|
Modification(ModificationType modificationType,
String name,
String shortName,
AtomChain atomChainAdded,
AtomChain atomChainRemoved,
AminoAcidPattern aminoAcidPattern,
CvTerm cvTerm)
Constructor for a reference modification.
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