Class IdentificationKeys
java.lang.Object
com.compomics.util.experiment.personalization.ExperimentObject
com.compomics.util.experiment.identification.IdentificationKeys
- All Implemented Interfaces:
Serializable
public class IdentificationKeys extends ExperimentObject
Placeholder for the keys of the objects in the identification.
- Author:
- Marc Vaudel
- See Also:
- Serialized Form
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Field Summary
Fields Modifier and Type Field Description ArrayList<String>
fractions
The names of the spectrum files (without extensions) that were used for the PSMs.static long
KEY
Key to use in the database.HashSet<Long>
peptideIdentification
List of the keys of all imported peptides.HashSet<Long>
proteinIdentification
List of the keys of all imported proteins.HashMap<String,HashSet<Long>>
proteinMap
A map linking protein accessions to all their protein matches keys.HashMap<String,HashSet<Long>>
spectrumIdentification
Map mapping spectra per file. -
Constructor Summary
Constructors Constructor Description IdentificationKeys()
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Method Summary
Methods inherited from class com.compomics.util.experiment.personalization.ExperimentObject
addUrParam, asLong, clearParametersMap, getId, getUrParam, getUrParams, removeUrParam, setId, setUrParams
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Field Details
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KEY
public static final long KEYKey to use in the database. -
proteinIdentification
List of the keys of all imported proteins. -
peptideIdentification
List of the keys of all imported peptides. -
spectrumIdentification
Map mapping spectra per file. -
proteinMap
A map linking protein accessions to all their protein matches keys. -
fractions
The names of the spectrum files (without extensions) that were used for the PSMs.
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Constructor Details
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IdentificationKeys
public IdentificationKeys()
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