Class ExtendedPeptide
java.lang.Object
com.compomics.util.experiment.identification.protein_sequences.digestion.ExtendedPeptide
public class ExtendedPeptide extends Object
This class packages together a peptide, its fixed modifications and its position on the protein.
- Author:
- Marc Vaudel
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Field Summary
Fields Modifier and Type Field Description String[]
fixedModifications
The fixed modifications of the peptide.Peptide
peptide
The peptide.int
position
The position of the peptide on the protein. -
Constructor Summary
Constructors Constructor Description ExtendedPeptide()
Empty default constructorExtendedPeptide(Peptide peptide, int position, String[] fixedModifications)
Constructor. -
Method Summary
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Field Details
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peptide
The peptide. -
position
public final int positionThe position of the peptide on the protein. -
fixedModifications
The fixed modifications of the peptide.
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Constructor Details
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ExtendedPeptide
public ExtendedPeptide()Empty default constructor -
ExtendedPeptide
Constructor.- Parameters:
peptide
- the peptideposition
- the position of the peptide on the proteinfixedModifications
- the fixed modifications on the peptide
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