Package com.compomics.util.experiment.quantification

Experiment classes related to quantification. The quantification methods implemented are: - MS2 reporter ion based quantification (for instance iTRAQ and TMT) - Spectrum counting (emPAI and NSAF, in PeptideShaker) TODO: - MS1 labeling strategies (like SILAC, 18O, ICAT, AQUA, ICPL) - MS1 label free quantification - TIC