All Implemented Interfaces:
Serializable

public class Tyrosine
extends AminoAcid
Tyrosine.
Author:
Marc Vaudel
See Also:
Serialized Form
  • Constructor Details

    • Tyrosine

      public Tyrosine()
      Constructor.
  • Method Details

    • iscombination

      public boolean iscombination()
      Description copied from class: AminoAcid
      Indicates whether the amino acid object refers to a combination of amino acids like B, J, Z or X.
      Specified by:
      iscombination in class AminoAcid
      Returns:
      an boolean indicating whether the amino acid object refers to a combination of amino acids like B, J, Z or X
    • getHydrophobicity

      public double getHydrophobicity()
      Description copied from class: AminoAcid
      Returns the hydrophobicity according to PMID 14730315.
      Specified by:
      getHydrophobicity in class AminoAcid
      Returns:
      the hydrophobicity
    • getHelicity

      public double getHelicity()
      Description copied from class: AminoAcid
      Returns the helicity according to PMID 14730315.
      Specified by:
      getHelicity in class AminoAcid
      Returns:
      the helicity
    • getBasicity

      public double getBasicity()
      Description copied from class: AminoAcid
      Returns the basicity according to PMID 14730315.
      Specified by:
      getBasicity in class AminoAcid
      Returns:
      the basicity
    • getPI

      public double getPI()
      Description copied from class: AminoAcid
      Returns the pI.
      Specified by:
      getPI in class AminoAcid
      Returns:
      the pI
    • getPK1

      public double getPK1()
      Description copied from class: AminoAcid
      Returns the pK1.
      Specified by:
      getPK1 in class AminoAcid
      Returns:
      the pK1
    • getPK2

      public double getPK2()
      Description copied from class: AminoAcid
      Returns the pK2.
      Specified by:
      getPK2 in class AminoAcid
      Returns:
      the pK2
    • getPKa

      public double getPKa()
      Description copied from class: AminoAcid
      Returns the pKa. 0.0 if none.
      Specified by:
      getPKa in class AminoAcid
      Returns:
      the pKa
    • getVanDerWaalsVolume

      public int getVanDerWaalsVolume()
      Description copied from class: AminoAcid
      Returns the van der Waals volume in Å3.
      Specified by:
      getVanDerWaalsVolume in class AminoAcid
      Returns:
      the van der Waals volume