Package com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features
This package contains features implemented for ms2pip.
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Class Summary Class Description AAIdentityFeatureAbsolute An amino acid identity feature at a fixed position on the peptide sequence.AAIdentityFeatureRelative An amino acid identity feature at a position relative to the end of an ion on the peptide sequence.AAPropertyFeatureAbsolute An amino acid property feature at a fixed position on the peptide sequence.AAPropertyFeatureRelative An amino acid property feature at a position relative to the end of an ion on the peptide sequence.AAPropertyRelationshipFeature Feature based on the relationship between two amino acid features.ComplementaryIonAminoAcidFeature Feature based on the amino acid properties of the complementary ion.ComplementaryIonFeature Feature based on a property of the complementary ion.ForwardIonAminoAcidFeature Feature based on the amino acid properties of the forward ion.ForwardIonFeature Feature based on a property of the forward ion.ModificationFeature Feature based on the modification status of an amino acid.PeptideAminoAcidFeature Feature based on the amino acid properties of a peptide.PeptideFeature Feature based on a peptide property. -
Enum Summary Enum Description AAPropertyRelationshipFeature.Relationship The different relationships implemented.ModificationFeature.Property Enum for the possible features.PeptideFeature.Property Enum for the possible features.