java.lang.Object
com.compomics.util.experiment.identification.protein_inference.fm_index.AccessionMetaData
All Implemented Interfaces:
Serializable

public class AccessionMetaData
extends Object
implements Serializable
Accession meta data.
Author:
Dominik Kopczynski
See Also:
Serialized Form
  • Constructor Details

    • AccessionMetaData

      public AccessionMetaData()
      Empty default constructor.
    • AccessionMetaData

      public AccessionMetaData​(AccessionMetaData accessionMetaData)
      Copy constructor
      Parameters:
      accessionMetaData - the item to copy
    • AccessionMetaData

      public AccessionMetaData​(String header)
      Constructor.
      Parameters:
      header - the header as parsed from the FASTA file
    • AccessionMetaData

      public AccessionMetaData​(String header, int index, int indexPart, int beginning)
      Constructor.
      Parameters:
      header - the header as parsed from the FASTA file
      index - the index
      indexPart - the index part
      beginning - beginning of the protein in the proteome sequence
  • Method Details

    • getHeader

      public Header getHeader()
      Returns the parsed header.
      Returns:
      the parsed header
    • getHeaderAsString

      public String getHeaderAsString()
      Returns the header string representation.
      Returns:
      the parsed header