Uses of Interface
com.compomics.util.experiment.biology.variants.Variant
Package | Description |
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com.compomics.util.experiment.biology.variants.amino_acids |
Type of implemented variants.
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com.compomics.util.experiment.identification.matches |
Experiment classes related to matches.
|
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Uses of Variant in com.compomics.util.experiment.biology.variants.amino_acids
Classes in com.compomics.util.experiment.biology.variants.amino_acids that implement Variant Modifier and Type Class Description class
Deletion
Class representing an amino acid deletion.class
Insertion
Class representing an amino acid insertion.class
Substitution
Class representing an amino acid substitution.class
Swap
Class representing an amino acid swap. -
Uses of Variant in com.compomics.util.experiment.identification.matches
Methods in com.compomics.util.experiment.identification.matches that return types with arguments of type Variant Modifier and Type Method Description HashMap<Integer,Variant>
PeptideVariantMatches. getVariantMatches()
Returns the map of variants indexed by 0 based position on the peptide.Constructor parameters in com.compomics.util.experiment.identification.matches with type arguments of type Variant Constructor Description PeptideVariantMatches(HashMap<Integer,Variant> variantMatches, int lengthDiff)
Constructor.