public class PeptideInference extends Object
Constructor and Description |
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PeptideInference() |
Modifier and Type | Method and Description |
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void |
peptideInference(Identification identification,
IdentificationParameters identificationParameters,
SequenceProvider sequenceProvider,
ModificationProvider modificationProvider,
WaitingHandler waitingHandler)
Infers the PTM localization and its confidence for the best match of
every spectrum.
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public void peptideInference(Identification identification, IdentificationParameters identificationParameters, SequenceProvider sequenceProvider, ModificationProvider modificationProvider, WaitingHandler waitingHandler)
identification
- The identification object containing the matches.identificationParameters
- The identification parameters of the
project.sequenceProvider
- The protein sequence provider to use.modificationProvider
- The modification provider to use.waitingHandler
- The waiting handler displaying progress to the
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