Package | Description |
---|---|
com.compomics.util.experiment.filtering |
Filtering classes.
|
com.compomics.util.experiment.identification.filtering |
Classes for the filtering of identification objects.
|
com.compomics.util.gui.parameters.identification.advanced |
Dialogs for advanced identification parameters.
|
com.compomics.util.parameters.identification.advanced |
Advanced Identification parameters.
|
Modifier and Type | Method and Description |
---|---|
Filter |
Filter.clone()
Clones the filter.
|
Modifier and Type | Method and Description |
---|---|
boolean |
Filter.isSameAs(Filter anotherFilter)
Indicates whether another filter is the same as the current filter.
|
Modifier and Type | Class and Description |
---|---|
class |
AssumptionFilter
Peptide Assumption filter.
|
class |
MatchFilter
Abstract representing a filter.
|
class |
PeptideFilter
Peptide filter.
|
class |
ProteinFilter
Protein filter.
|
class |
PsmFilter
PSM filter.
|
Modifier and Type | Method and Description |
---|---|
boolean |
MatchFilter.isSameAs(Filter anotherFilter) |
Modifier and Type | Method and Description |
---|---|
Filter |
ValidationQCParametersDialog.createPeptideFilter()
Creates a new peptide filter.
|
Filter |
ValidationQCParametersDialog.createProteinFilter()
Creates a new protein filter.
|
Filter |
ValidationQCParametersDialog.createPsmFilter()
Creates a new PSM filter.
|
Filter |
ValidationQCParametersDialog.editFilter(Filter filter)
Edits the given filter.
|
Modifier and Type | Method and Description |
---|---|
Filter |
ValidationQCParametersDialog.editFilter(Filter filter)
Edits the given filter.
|
Modifier and Type | Method and Description |
---|---|
ArrayList<Filter> |
ValidationQcParameters.getPeptideFilters()
Returns the list of peptide quality filters.
|
ArrayList<Filter> |
ValidationQcParameters.getProteinFilters()
Returns the list of protein quality filters.
|
ArrayList<Filter> |
ValidationQcParameters.getPsmFilters()
Returns the list of PSM quality filters.
|
Modifier and Type | Method and Description |
---|---|
void |
ValidationQcParameters.setPeptideFilters(ArrayList<Filter> peptideFilters)
Sets the list of peptide quality filters.
|
void |
ValidationQcParameters.setProteinFilters(ArrayList<Filter> proteinFilters)
Sets the list of protein quality filters.
|
void |
ValidationQcParameters.setPsmFilters(ArrayList<Filter> psmFilters)
Sets the list of PSM quality filters.
|
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