Package | Description |
---|---|
com.compomics.util.experiment.biology.variants.amino_acids |
Type of implemented variants.
|
com.compomics.util.experiment.identification.matches |
Experiment classes related to matches.
|
Modifier and Type | Class and Description |
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class |
Deletion
Class representing an amino acid deletion.
|
class |
Insertion
Class representing an amino acid insertion.
|
class |
Substitution
Class representing an amino acid substitution.
|
class |
Swap
Class representing an amino acid swap.
|
Modifier and Type | Method and Description |
---|---|
HashMap<Integer,Variant> |
PeptideVariantMatches.getVariantMatches()
Returns the map of variants indexed by 0 based position on the peptide.
|
Constructor and Description |
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PeptideVariantMatches(HashMap<Integer,Variant> variantMatches,
int lengthDiff)
Constructor.
|
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