Package | Description |
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com.compomics.util.experiment.biology.enzymes |
Classes related to enzymes.
|
com.compomics.util.experiment.biology.ions |
Experiment classes related to ions.
|
com.compomics.util.experiment.biology.ions.impl |
Ion implementations.
|
com.compomics.util.experiment.biology.modifications | |
com.compomics.util.experiment.identification.matches |
Experiment classes related to matches.
|
com.compomics.util.gui.modification |
PTM GUI dialogs.
|
com.compomics.util.pride |
Objects related to mapping to PRIDE.
|
com.compomics.util.pride.prideobjects |
Objects related to mapping experiment annotation to PRIDE.
|
Class and Description |
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CvTerm
A simple CvTerm object.
|
Class and Description |
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CvTerm
A simple CvTerm object.
|
Class and Description |
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CvTerm
A simple CvTerm object.
|
Class and Description |
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CvTerm
A simple CvTerm object.
|
Class and Description |
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CvTerm
A simple CvTerm object.
|
Class and Description |
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PtmToPrideMap
Map linking user modification names to Unimod CV terms.
|
Class and Description |
---|
CvTerm
A simple CvTerm object.
|
PrideObjectsFactory
This factory manages the pride objects saved in the user folder.
|
PtmToPrideMap
Map linking user modification names to Unimod CV terms.
|
Class and Description |
---|
CvTerm
A simple CvTerm object.
|
PrideObject
Interface for a PRIDE object.
|
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