Package | Description |
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com.compomics.util.experiment.identification |
Experiment classes related to identifications.
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com.compomics.util.experiment.identification.matches_iterators |
Identification match iterators.
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com.compomics.util.gui.modification |
PTM GUI dialogs.
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Modifier and Type | Method and Description |
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PeptideMatch |
Identification.getPeptideMatch(long key)
Returns the peptide match with the given key.
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Modifier and Type | Method and Description |
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void |
Identification.addPeptideMatch(long key,
PeptideMatch peptideMatch)
Adds a peptide match.
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Modifier and Type | Method and Description |
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PeptideMatch |
PeptideMatchesIterator.next()
Returns the next match and updates the buffer.
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Constructor and Description |
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ModificationTable(Identification identification,
AnnotationParameters annotationParameters,
PeptideMatch peptideMatch,
Modification modification,
boolean areaChart,
ModificationParameters modificationParameters,
SequenceProvider sequenceProvider,
SpectrumProvider spectrumProvider,
SequenceMatchingParameters modificationSequenceMatchingParameters)
Constructor.
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