Package | Description |
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com.compomics.util.experiment.io.mass_spectrometry.apl |
Classes for the handling of Andromeda peak list (apl) files.
|
com.compomics.util.experiment.mass_spectrometry |
Experiment classes related to mass spectrometry.
|
com.compomics.util.parameters.identification.tool_specific |
Parameters settings for the search algorithms.
|
Modifier and Type | Method and Description |
---|---|
void |
AplFileWriter.writeSpectrum(String spectrumTitle,
Spectrum spectrum,
FragmentationMethod fragmentationMethod,
int charge)
Writes the given spectrum to the file.
|
Modifier and Type | Method and Description |
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static FragmentationMethod |
FragmentationMethod.valueOf(String name)
Returns the enum constant of this type with the specified name.
|
static FragmentationMethod[] |
FragmentationMethod.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
Modifier and Type | Method and Description |
---|---|
FragmentationMethod |
AndromedaParameters.getFragmentationMethod()
Returns the fragmentation method used.
|
Modifier and Type | Method and Description |
---|---|
void |
AndromedaParameters.setFragmentationMethod(FragmentationMethod fragmentationMethod)
Sets the fragmentation method used.
|
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