Package | Description |
---|---|
com.compomics.util.experiment.identification.features |
Classes for the generation of identification features.
|
com.compomics.util.experiment.units |
Unit related classes.
|
com.compomics.util.parameters.quantification.spectrum_counting |
Spectrum counting parameters.
|
Modifier and Type | Method and Description |
---|---|
double |
IdentificationFeaturesGenerator.getNormalizedSpectrumCounting(long proteinMatchKey,
Metrics metrics,
UnitOfMeasurement unit,
Double referenceMass,
SpectrumCountingMethod method)
Returns the spectrum counting metric of the protein match of interest
using the preference settings normalized to the injected protein amount.
|
double |
IdentificationFeaturesGenerator.getNormalizedSpectrumCounting(long proteinMatchKey,
UnitOfMeasurement unit,
SpectrumCountingMethod method)
Returns the spectrum counting metric of the protein match of interest
using the preference settings normalized to the injected protein amount.
|
Modifier and Type | Field and Description |
---|---|
static UnitOfMeasurement |
Units.fmol
Femtomol.
|
static UnitOfMeasurement |
Units.percent
percent.
|
static UnitOfMeasurement |
Units.ppm
ppm.
|
Modifier and Type | Method and Description |
---|---|
boolean |
UnitOfMeasurement.isSameAs(UnitOfMeasurement unitOfMeasurement)
Indicates whether the given unit of measurement is the same as another.
|
Modifier and Type | Method and Description |
---|---|
UnitOfMeasurement |
SpectrumCountingParameters.getUnit()
Returns the unit used for normalization.
|
Modifier and Type | Method and Description |
---|---|
void |
SpectrumCountingParameters.setUnit(UnitOfMeasurement unit)
Sets the unit used for normalization.
|
Copyright © 2021. All rights reserved.