Class PklFile

java.lang.Object
com.compomics.util.io.PklFile

public class PklFile
extends Object
Contains information about the contents of one PKL file.
Author:
Harald Barsnes
  • Constructor Details

    • PklFile

      public PklFile()
      Empty default constructor
    • PklFile

      public PklFile​(File pklFile) throws IOException
      Parse a PKL file and store the details in the PKLFile object.
      Parameters:
      pklFile - the file to parse
      Throws:
      IOException - if an IOException occurs
  • Method Details

    • getPrecurorCharge

      public int getPrecurorCharge()
      Returns:
      the precurorCharge
    • setPrecurorCharge

      public void setPrecurorCharge​(int precurorCharge)
      Parameters:
      precurorCharge - the precurorCharge to set
    • getPrecursorMz

      public double getPrecursorMz()
      Returns:
      the precursorMz
    • setPrecursorMz

      public void setPrecursorMz​(double precursorMz)
      Parameters:
      precursorMz - the precursorMz to set
    • getPrecursorIntensity

      public double getPrecursorIntensity()
      Returns:
      the precursorIntensity
    • setPrecursorIntensity

      public void setPrecursorIntensity​(double precursorIntensity)
      Parameters:
      precursorIntensity - the precursorIntensity to set
    • getMzValues

      public double[] getMzValues()
      Returns:
      the mzValues
    • setMzValues

      public void setMzValues​(double[] mzValues)
      Parameters:
      mzValues - the mzValues to set
    • getIntensityValues

      public double[] getIntensityValues()
      Returns:
      the intensityValues
    • setIntensityValues

      public void setIntensityValues​(double[] intensityValues)
      Parameters:
      intensityValues - the intensityValues to set
    • getFileName

      public String getFileName()
      Returns:
      the fileName
    • setFileName

      public void setFileName​(String fileName)
      Parameters:
      fileName - the fileName to set
    • getSpectrumFileId

      public String getSpectrumFileId()
      Returns:
      the spectrumFileId
    • setSpectrumFileId

      public void setSpectrumFileId​(String spectrumFileId)
      Parameters:
      spectrumFileId - the spectrumFileId to set