Uses of Class
com.compomics.util.experiment.identification.spectrum_annotation.AnnotationParameters

Packages that use AnnotationParameters 
Package Description
com.compomics.util.experiment.identification.modification
Modification mapping and localization.
com.compomics.util.experiment.identification.modification.scores
PTM scores.
com.compomics.util.experiment.identification.psm_scoring.psm_scores
Main PTM scoring classes.
com.compomics.util.experiment.identification.spectrum_annotation
Classes used for ms2 spectrum annotation.
com.compomics.util.experiment.identification.spectrum_annotation.spectrum_annotators
This package contains implementations of the SpectrumAnnotator allowing the annotation of all ions.
com.compomics.util.gui.modification
PTM GUI dialogs.
com.compomics.util.gui.parameters.identification.advanced
Dialogs for advanced identification parameters.
com.compomics.util.parameters.identification
Identification parameters.