Uses of Interface
com.compomics.util.experiment.identification.amino_acid_tags.TagComponent
Package | Description |
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com.compomics.util.experiment.biology.aminoacids.sequence |
Classes related to the handling of protein sequences.
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com.compomics.util.experiment.identification.amino_acid_tags |
Amino Acid Tag classes.
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Uses of TagComponent in com.compomics.util.experiment.biology.aminoacids.sequence
Classes in com.compomics.util.experiment.biology.aminoacids.sequence that implement TagComponent Modifier and Type Class Description class
AminoAcidSequence
This class represents a series of amino acids with associated modifications.Methods in com.compomics.util.experiment.biology.aminoacids.sequence with parameters of type TagComponent Modifier and Type Method Description boolean
AminoAcidSequence. isSameAs(TagComponent anotherCompontent, SequenceMatchingParameters sequenceMatchingPreferences)
boolean
AminoAcidSequence. isSameSequenceAndModificationStatusAs(TagComponent anotherCompontent, SequenceMatchingParameters sequenceMatchingPreferences)
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Uses of TagComponent in com.compomics.util.experiment.identification.amino_acid_tags
Classes in com.compomics.util.experiment.identification.amino_acid_tags that implement TagComponent Modifier and Type Class Description class
MassGap
An undefined mass gap.Methods in com.compomics.util.experiment.identification.amino_acid_tags that return types with arguments of type TagComponent Modifier and Type Method Description ArrayList<TagComponent>
Tag. getContent()
Returns the content of this tag as a list.Methods in com.compomics.util.experiment.identification.amino_acid_tags with parameters of type TagComponent Modifier and Type Method Description boolean
MassGap. isSameAs(TagComponent anotherCompontent, SequenceMatchingParameters sequenceMatchingPreferences)
boolean
TagComponent. isSameAs(TagComponent anotherCompontent, SequenceMatchingParameters sequenceMatchingPreferences)
Indicates whether another component is the same as the component of interest.boolean
MassGap. isSameSequenceAndModificationStatusAs(TagComponent anotherCompontent, SequenceMatchingParameters sequenceMatchingPreferences)
boolean
TagComponent. isSameSequenceAndModificationStatusAs(TagComponent anotherCompontent, SequenceMatchingParameters sequenceMatchingPreferences)
Indicates whether another component is the same as the component of interest.Method parameters in com.compomics.util.experiment.identification.amino_acid_tags with type arguments of type TagComponent Modifier and Type Method Description void
Tag. setContent(ArrayList<TagComponent> content)
Sets the content for the given tag.