Class ThermoRawFileParserParameters
java.lang.Object
com.compomics.util.experiment.mass_spectrometry.thermo_raw_file_parser.ThermoRawFileParserParameters
public class ThermoRawFileParserParameters extends Object
The parameters to use when running ThermoRawFileParser.
- Author:
- Harald Barsnes
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Constructor Summary
Constructors Constructor Description ThermoRawFileParserParameters()
Constructor. -
Method Summary
Modifier and Type Method Description ThermoRawFileParserOutputFormat
getOutputFormat()
Returns the format to convert to.boolean
isPeackPicking()
Returns true if peak picking is to be performed.void
setMsFormat(ThermoRawFileParserOutputFormat outputFormat)
Sets the format to convert to.void
setPeackPicking(boolean peackPicking)
Set if peak picking is to be performed.
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Constructor Details
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ThermoRawFileParserParameters
public ThermoRawFileParserParameters()Constructor.
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Method Details
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getOutputFormat
Returns the format to convert to.- Returns:
- the format to convert to
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setMsFormat
Sets the format to convert to.- Parameters:
outputFormat
- the format to convert to
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isPeackPicking
public boolean isPeackPicking()Returns true if peak picking is to be performed.- Returns:
- the peackPicking true if peak picking is to be performed
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setPeackPicking
public void setPeackPicking(boolean peackPicking)Set if peak picking is to be performed.- Parameters:
peackPicking
- the peackPicking to set
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