Uses of Package
com.compomics.util.experiment.biology.ions.impl
Package | Description |
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com.compomics.util.experiment.biology.ions.impl |
Ion implementations.
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com.compomics.util.experiment.biology.modifications | |
com.compomics.util.experiment.identification.modification |
Modification mapping and localization.
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com.compomics.util.experiment.identification.spectrum_annotation.simple_annotators |
This package contains implementations of the SimpleAnnotator allowing the annotation of specific sets of ions.
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com.compomics.util.experiment.identification.spectrum_annotation.spectrum_annotators |
This package contains implementations of the SpectrumAnnotator allowing the annotation of all ions.
|
com.compomics.util.experiment.quantification.reporterion |
Experiment classes related to reporter ions.
|
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Classes in com.compomics.util.experiment.biology.ions.impl used by com.compomics.util.experiment.biology.ions.impl Class Description ElementaryIon This class represents an elementary ion.ImmoniumIon Represents an immonium ion.RelatedIon Represents a related ion, i.e., an ion that is related to a given amino acid, and is its own factory.ReporterIon This class models a reporter ion and is its own factory. -
Classes in com.compomics.util.experiment.biology.ions.impl used by com.compomics.util.experiment.biology.modifications Class Description ReporterIon This class models a reporter ion and is its own factory. -
Classes in com.compomics.util.experiment.biology.ions.impl used by com.compomics.util.experiment.identification.modification Class Description PeptideFragmentIon This class models a peptide fragment ion. -
Classes in com.compomics.util.experiment.biology.ions.impl used by com.compomics.util.experiment.identification.spectrum_annotation.simple_annotators Class Description ReporterIon This class models a reporter ion and is its own factory. -
Classes in com.compomics.util.experiment.biology.ions.impl used by com.compomics.util.experiment.identification.spectrum_annotation.spectrum_annotators Class Description ReporterIon This class models a reporter ion and is its own factory. -
Classes in com.compomics.util.experiment.biology.ions.impl used by com.compomics.util.experiment.quantification.reporterion Class Description ReporterIon This class models a reporter ion and is its own factory.