Class EnsemblVersion
java.lang.Object
com.compomics.util.experiment.biology.genes.ensembl.EnsemblVersion
public class EnsemblVersion extends Object
Class for the handling of Ensembl versions.
- Author:
- Marc Vaudel, Harald Barsnes
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Constructor Summary
Constructors Constructor Description EnsemblVersion()
Empty default constructor -
Method Summary
Modifier and Type Method Description static Integer
getCurrentEnsemblVersion(EnsemblGenomesSpecies.EnsemblGenomeDivision ensemblGenomeDivision)
Returns the current Ensembl version number.static String
getEnsemblSchemaName(EnsemblGenomesSpecies.EnsemblGenomeDivision ensemblGenomeDivision)
Returns the name of the Ensembl schema for BioMart queries.
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Constructor Details
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EnsemblVersion
public EnsemblVersion()Empty default constructor
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Method Details
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getCurrentEnsemblVersion
public static Integer getCurrentEnsemblVersion(EnsemblGenomesSpecies.EnsemblGenomeDivision ensemblGenomeDivision)Returns the current Ensembl version number. Null if not found.- Parameters:
ensemblGenomeDivision
- the Ensembl genome division, null if not Ensembl genome- Returns:
- the current Ensembl version number
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getEnsemblSchemaName
public static String getEnsemblSchemaName(EnsemblGenomesSpecies.EnsemblGenomeDivision ensemblGenomeDivision)Returns the name of the Ensembl schema for BioMart queries.- Parameters:
ensemblGenomeDivision
- the Ensembl genome division- Returns:
- the name of the Ensembl schema for BioMart queries
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