Uses of Package
com.compomics.util.experiment.identification
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Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification Class Description Advocate The advocate of a hit can be a search engine, a sequencing algorithm, a rescoring algorithm, etc.Advocate.AdvocateType The different types of advocates.IdentificationKeys Placeholder for the keys of the objects in the identification.IdentificationMatch.MatchType The type of match. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification.features Class Description Identification This class interacts with the back-end database to manage identification objects.IdentificationMatch This is an abstract class for an identification match. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification.filtering Class Description Identification This class interacts with the back-end database to manage identification objects. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification.matches Class Description IdentificationMatch This is an abstract class for an identification match.IdentificationMatch.MatchType The type of match. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification.matches_iterators Class Description Identification This class interacts with the back-end database to manage identification objects. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification.modification.scores Class Description SpectrumIdentificationAssumption Spectrum identification assumption made by an identification algorithm. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification.peptide_inference Class Description Identification This class interacts with the back-end database to manage identification objects. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification.protein_inference Class Description Identification This class interacts with the back-end database to manage identification objects. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification.spectrum_annotation Class Description SpectrumIdentificationAssumption Spectrum identification assumption made by an identification algorithm. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.identification.spectrum_assumptions Class Description SpectrumIdentificationAssumption Spectrum identification assumption made by an identification algorithm. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.experiment.quantification.spectrumcounting Class Description Identification This class interacts with the back-end database to manage identification objects. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.gui.modification Class Description Identification This class interacts with the back-end database to manage identification objects. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.gui.parameters.identification Class Description Advocate The advocate of a hit can be a search engine, a sequencing algorithm, a rescoring algorithm, etc. -
Classes in com.compomics.util.experiment.identification used by com.compomics.util.parameters.identification.tool_specific Class Description Advocate The advocate of a hit can be a search engine, a sequencing algorithm, a rescoring algorithm, etc.