java.lang.Object
com.compomics.util.experiment.identification.peptide_fragmentation.models.SequestFragmentationModel

public class SequestFragmentationModel
extends Object
Fragmentation model originally described in the Sequest algorithm (https://www.ncbi.nlm.nih.gov/pubmed/24226387) adapted to utilities objects.
Author:
Marc Vaudel
  • Constructor Details

  • Method Details

    • getIntensity

      public static Double getIntensity​(Ion ion)
      Returns the intensity expected for the given ion. 50.0 for b and y ions with no neutral losses. 25.0 for a ions and b and y ions with neutral losses. 0.0 for other peaks.
      Parameters:
      ion - the ion of interest
      Returns:
      the expected intensity