Package com.compomics.util.experiment.quantification
Experiment classes related to quantification.
The quantification methods implemented are:
- MS2 reporter ion based quantification (for instance iTRAQ and TMT)
- Spectrum counting (emPAI and NSAF, in PeptideShaker)
TODO:
- MS1 labeling strategies (like SILAC, 18O, ICAT, AQUA, ICPL)
- MS1 label free quantification
- TIC
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Class Summary Class Description Quantification An abstract quantification class. -
Enum Summary Enum Description Quantification.QuantificationMethod The implemented quantification methods.