Interface IdentificationAlgorithmParameter

All Known Implementing Classes:
AndromedaParameters, CometParameters, DirecTagParameters, MetaMorpheusParameters, MsAmandaParameters, MsgfParameters, MyriMatchParameters, NovorParameters, OmssaParameters, PepnovoParameters, PNovoParameters, TideParameters, XtandemParameters

public interface IdentificationAlgorithmParameter
Interface for the algorithm specific parameters.
Author:
Marc Vaudel
  • Method Summary

    Modifier and Type Method Description
    boolean equals​(IdentificationAlgorithmParameter identificationAlgorithmParameter)
    Indicates whether another identificationAlgorithmParameter has the same parameters.
    Advocate getAlgorithm()
    Returns the identification algorithm.
    String toString​(boolean html)
    Returns the parameters as a string.
  • Method Details

    • getAlgorithm

      Advocate getAlgorithm()
      Returns the identification algorithm.
      Returns:
      the identification algorithm
    • equals

      boolean equals​(IdentificationAlgorithmParameter identificationAlgorithmParameter)
      Indicates whether another identificationAlgorithmParameter has the same parameters.
      Parameters:
      identificationAlgorithmParameter - the other identificationAlgorithmParameter
      Returns:
      true if the algorithm and parameters are the same
    • toString

      String toString​(boolean html)
      Returns the parameters as a string.
      Parameters:
      html - use HTML formatting
      Returns:
      the parameters as a string