Uses of Package
com.compomics.util.experiment.identification

Packages that use com.compomics.util.experiment.identification 
Package Description
com.compomics.util.experiment.identification
Experiment classes related to identifications.
com.compomics.util.experiment.identification.features
Classes for the generation of identification features.
com.compomics.util.experiment.identification.filtering
Classes for the filtering of identification objects.
com.compomics.util.experiment.identification.matches
Experiment classes related to matches.
com.compomics.util.experiment.identification.matches_iterators
Identification match iterators.
com.compomics.util.experiment.identification.modification.scores
PTM scores.
com.compomics.util.experiment.identification.peptide_inference
Classes related to peptide inference.
com.compomics.util.experiment.identification.protein_inference
Classes related to protein inference.
com.compomics.util.experiment.identification.spectrum_annotation
Classes used for ms2 spectrum annotation.
com.compomics.util.experiment.identification.spectrum_assumptions
Implementations of the SpectrumIdentificationAssumption.
com.compomics.util.experiment.quantification.spectrumcounting
Experiment classes related to spectrum counting.
com.compomics.util.gui.modification
PTM GUI dialogs.
com.compomics.util.gui.parameters.identification
GUI classes for parameters, settings and preferences used for identification.
com.compomics.util.parameters.identification.tool_specific
Parameters settings for the search algorithms.