Uses of Class
com.compomics.util.experiment.units.UnitOfMeasurement
Package | Description |
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com.compomics.util.experiment.identification.features |
Classes for the generation of identification features.
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com.compomics.util.experiment.units |
Unit related classes.
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com.compomics.util.parameters.quantification.spectrum_counting |
Spectrum counting parameters.
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Uses of UnitOfMeasurement in com.compomics.util.experiment.identification.features
Methods in com.compomics.util.experiment.identification.features with parameters of type UnitOfMeasurement Modifier and Type Method Description double
IdentificationFeaturesGenerator. getNormalizedSpectrumCounting(long proteinMatchKey, Metrics metrics, UnitOfMeasurement unit, Double referenceMass, SpectrumCountingMethod method)
Returns the spectrum counting metric of the protein match of interest using the preference settings normalized to the injected protein amount.double
IdentificationFeaturesGenerator. getNormalizedSpectrumCounting(long proteinMatchKey, UnitOfMeasurement unit, SpectrumCountingMethod method)
Returns the spectrum counting metric of the protein match of interest using the preference settings normalized to the injected protein amount. -
Uses of UnitOfMeasurement in com.compomics.util.experiment.units
Fields in com.compomics.util.experiment.units declared as UnitOfMeasurement Modifier and Type Field Description static UnitOfMeasurement
Units. fmol
Femtomol.static UnitOfMeasurement
Units. percent
percent.static UnitOfMeasurement
Units. ppm
ppm.Methods in com.compomics.util.experiment.units with parameters of type UnitOfMeasurement Modifier and Type Method Description boolean
UnitOfMeasurement. isSameAs(UnitOfMeasurement unitOfMeasurement)
Indicates whether the given unit of measurement is the same as another. -
Uses of UnitOfMeasurement in com.compomics.util.parameters.quantification.spectrum_counting
Methods in com.compomics.util.parameters.quantification.spectrum_counting that return UnitOfMeasurement Modifier and Type Method Description UnitOfMeasurement
SpectrumCountingParameters. getUnit()
Returns the unit used for normalization.Methods in com.compomics.util.parameters.quantification.spectrum_counting with parameters of type UnitOfMeasurement Modifier and Type Method Description void
SpectrumCountingParameters. setUnit(UnitOfMeasurement unit)
Sets the unit used for normalization.