# Search parameters
enzyme = Trypsin
fragmentation = HCD
massAnalyzer = FT
fragmentIonErrorTol = 0.02Da
precursorErrorTol = 10.0ppm

# Variable modifications
variableModifications = Oxidation of M

# Fixed modifications
fixedModifications = Carbamidomethylation of C

# The residue which will not be used in de novo algorithm.
# I is disabled as default because it is the same as L
# U is disabled because it is very rare
forbiddenResidues = I,U
