com.compomics.util.experiment.biology

Class GlyconFactory

java.lang.Object

com.compomics.util.experiment.biology.GlyconFactory

public class GlyconFactory
extends java.lang.Object

This factory will provide theoretic glycons.

Author:

Marc Vaudel

Method Summary

Methods

Modifier and Type	Method and Description
java.util.ArrayList<Glycon>	getGlycons() A getter to access the glycons.
static GlyconFactory	getInstance() Static method to get the factory instance.
void	importGlycons(java.io.File aFile) Import glycons from an xml file.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

getInstance

public static GlyconFactory getInstance()

Static method to get the factory instance.

Returns:

the instance of the factory

getGlycons

public java.util.ArrayList<Glycon> getGlycons()

A getter to access the glycons.

Returns:

all glycons imported

importGlycons

public void importGlycons(java.io.File aFile)
                   throws org.xmlpull.v1.XmlPullParserException,
                          java.io.IOException

Import glycons from an xml file.

Parameters:

aFile - xml file to parse

Throws:

org.xmlpull.v1.XmlPullParserException - exception thrown if a parsing issue is encountered

java.io.IOException - exception thrown if an issue with the file is encountered