com.compomics.util.pdbfinder

Class FindPdbForUniprotAccessions

java.lang.Object

com.compomics.util.pdbfinder.FindPdbForUniprotAccessions

public class FindPdbForUniprotAccessions
extends java.lang.Object

Maps uniprot protein accession numbers to PDB file ids.

Author:

Niklaas Colaert

Constructor Summary

Constructors

Constructor and Description
FindPdbForUniprotAccessions(java.lang.String aProteinAccession)

Method Summary

Methods

Modifier and Type	Method and Description
java.util.Vector<PdbParameter>	getPdbs() Returns a vector of the PDB files mapped to the given protein accession number.
static void	main(java.lang.String[] args) Main method.
boolean	urlWasRead() Returns true if the PDB URL was read, false otherwise.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FindPdbForUniprotAccessions

public FindPdbForUniprotAccessions(java.lang.String aProteinAccession)

Parameters:

aProteinAccession -

Method Detail

urlWasRead

public boolean urlWasRead()

Returns true if the PDB URL was read, false otherwise.

Returns:

true if the PDB URL was read, false otherwise

getPdbs

public java.util.Vector<PdbParameter> getPdbs()

Returns a vector of the PDB files mapped to the given protein accession number.

Returns:

a vector of the PDB files

main

public static void main(java.lang.String[] args)

Main method. Used for testing purposes.

Parameters:

args -