com.compomics.util.pride.prideobjects

Class Sample

java.lang.Object

com.compomics.util.pride.prideobjects.Sample

All Implemented Interfaces:

PrideObject, java.io.Serializable

public class Sample
extends java.lang.Object
implements PrideObject, java.io.Serializable

An object for storing Sample details.

Author:

Harald Barsnes

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
Sample(java.lang.String name, java.util.ArrayList<CvTerm> cvTerms) Create a new Sample object.

Method Summary

Methods

Modifier and Type	Method and Description
java.util.ArrayList<CvTerm>	getCvTerms() Returns the CV terms.
static java.util.ArrayList<Sample>	getDefaultSamples() Returns a list of default samples.
java.lang.String	getFileName() Returns the name to use when serializing the object.
java.lang.String	getName() Returns the name of the sample.
void	setCvTerms(java.util.ArrayList<CvTerm> cvTerms) Set the CV terms.
void	setName(java.lang.String name) Set the name of the sample.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Sample

public Sample(java.lang.String name,
      java.util.ArrayList<CvTerm> cvTerms)

Create a new Sample object.

Parameters:

name -

cvTerms -

Method Detail

getName

public java.lang.String getName()

Returns the name of the sample.

Returns:

the name

setName

public void setName(java.lang.String name)

Set the name of the sample.

Parameters:

name - the name to set

getCvTerms

public java.util.ArrayList<CvTerm> getCvTerms()

Returns the CV terms.

Returns:

the cvTerms

setCvTerms

public void setCvTerms(java.util.ArrayList<CvTerm> cvTerms)

Set the CV terms.

Parameters:

cvTerms - the cvTerms to set

getDefaultSamples

public static java.util.ArrayList<Sample> getDefaultSamples()

Returns a list of default samples.

Returns:

a list of default samples

getFileName

public java.lang.String getFileName()

Description copied from interface: PrideObject

Returns the name to use when serializing the object.

Specified by:

getFileName in interface PrideObject

Returns:

the name to use when serializing the object