com.compomics.util.experiment.identification

Interface IdentificationAlgorithmParameter

All Superinterfaces:

Serializable

All Known Implementing Classes:

DirecTagParameters, MsAmandaParameters, MsgfParameters, OmssaParameters, PepnovoParameters, XtandemParameters

public interface IdentificationAlgorithmParameter
extends Serializable

Interface for the algorithm specific parameters.

Author:

Marc Vaudel

Method Summary

Methods

Modifier and Type	Method and Description
boolean	equals(IdentificationAlgorithmParameter identificationAlgorithmParameter) Indicates whether another identificationAlgorithmParameter has the same parameters.
Advocate	getAlgorithm() Returns the identification algorithm.
String	toString(boolean html) Returns the parameters as a string.

Method Detail

getAlgorithm

Advocate getAlgorithm()

Returns the identification algorithm.

Returns:

the identification algorithm

equals

boolean equals(IdentificationAlgorithmParameter identificationAlgorithmParameter)

Indicates whether another identificationAlgorithmParameter has the same parameters.

Parameters:

identificationAlgorithmParameter - the other identificationAlgorithmParameter

Returns:

true if the algorithm and parameters are the same

toString

String toString(boolean html)

Returns the parameters as a string.

Parameters:

html - use HTML formatting

Returns:

the parameters as a string