Uses of Package
com.compomics.util.pride

Packages that use com.compomics.util.pride

Package	Description
com.compomics.util.experiment.biology	This package contains experiement classes related to biological entities.
com.compomics.util.experiment.biology.ions	This package contains experiment classes related to ions.
com.compomics.util.experiment.identification.matches	This package contains experiment classes releated to matches.
com.compomics.util.gui.ptm
com.compomics.util.pride
com.compomics.util.pride.prideobjects

Classes in com.compomics.util.pride used by com.compomics.util.experiment.biology

Class and Description
CvTerm A simple CvTerm object.

Classes in com.compomics.util.pride used by com.compomics.util.experiment.biology.ions

Class and Description
CvTerm A simple CvTerm object.

Classes in com.compomics.util.pride used by com.compomics.util.experiment.identification.matches

Class and Description
CvTerm A simple CvTerm object.

Classes in com.compomics.util.pride used by com.compomics.util.gui.ptm

Class and Description
PtmToPrideMap Map linking user modification names to Unimod CV terms.

Classes in com.compomics.util.pride used by com.compomics.util.pride

Class and Description
CvTerm A simple CvTerm object.
PrideObjectsFactory This factory manages the pride objects saved in the user folder.
PtmToPrideMap Map linking user modification names to Unimod CV terms.

Classes in com.compomics.util.pride used by com.compomics.util.pride.prideobjects

Class and Description
CvTerm A simple CvTerm object.
PrideObject Interface for a PRIDE object.