Uses of Class
com.compomics.util.experiment.biology.ions.impl.RelatedIon

Packages that use RelatedIon

Package	Description
com.compomics.util.experiment.biology.ions.impl	Ion implementations.

Uses of RelatedIon in com.compomics.util.experiment.biology.ions.impl

Fields in com.compomics.util.experiment.biology.ions.impl declared as RelatedIon

Modifier and Type	Field	Description
static final RelatedIon	RelatedIon.RELATED_C_1	Related ion for C.
static final RelatedIon	RelatedIon.RELATED_C_2	Related ion for C.
static final RelatedIon	RelatedIon.RELATED_D_1	Related ion for D.
static final RelatedIon	RelatedIon.RELATED_E_1	Related ion for E.
static final RelatedIon	RelatedIon.RELATED_F_1	Related ion for F.
static final RelatedIon	RelatedIon.RELATED_H_1	Related ion for H (C4H5N2).
static final RelatedIon	RelatedIon.RELATED_H_2	Related ion for H.
static final RelatedIon	RelatedIon.RELATED_K_1	Related ion for K.
static final RelatedIon	RelatedIon.RELATED_K_2	Related ion for K.
static final RelatedIon	RelatedIon.RELATED_K_3	Related ion for K.
static final RelatedIon	RelatedIon.RELATED_M_1	Related ion for M (C2H4S).
static final RelatedIon	RelatedIon.RELATED_N_1	Related ion for N.
static final RelatedIon	RelatedIon.RELATED_Q_1	Related ion for Q.
static final RelatedIon	RelatedIon.RELATED_Q_2	Related ion for Q.
static final RelatedIon	RelatedIon.RELATED_R_1	Related ion for R.
static final RelatedIon	RelatedIon.RELATED_R_2	Related ion for R.
static final RelatedIon	RelatedIon.RELATED_R_3	Related ion for R.
static final RelatedIon	RelatedIon.RELATED_R_4	Related ion for R (C5H10N2O).
static final RelatedIon	RelatedIon.RELATED_W_1	Related ion for W (C9H7N).
static final RelatedIon	RelatedIon.RELATED_Y_1	Related ion for Y (C7H7O).

Methods in com.compomics.util.experiment.biology.ions.impl that return types with arguments of type RelatedIon

Modifier and Type	Method	Description
static ArrayList<RelatedIon>	RelatedIon.getRelatedIons(char aa)	Returns the list of related ions for the given amino acid.
static ArrayList<RelatedIon>	RelatedIon.getRelatedIons(AminoAcid aminoAcidTarget)	Returns the list of related ions for the given amino acid.

Methods in com.compomics.util.experiment.biology.ions.impl with parameters of type RelatedIon

Modifier and Type	Method	Description
boolean	RelatedIon.isSameAs(RelatedIon anotherRelatedIon)	Compares the current related ion with another one based on their composition.