Package com.compomics.util.experiment.biology.taxonomy.mappings

Enum EnsemblSpecies.EnsemblDivision

java.lang.Object

java.lang.Enum<EnsemblSpecies.EnsemblDivision>

com.compomics.util.experiment.biology.taxonomy.mappings.EnsemblSpecies.EnsemblDivision

All Implemented Interfaces:

Serializable, Comparable<EnsemblSpecies.EnsemblDivision>, java.lang.constant.Constable

Enclosing class:

EnsemblSpecies

public static enum EnsemblSpecies.EnsemblDivision
extends Enum<EnsemblSpecies.EnsemblDivision>

Enum of the different Ensembl divisions.

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
bacteria
fungi
metazoa
plants
protists
vertebrates

Field Summary

Fields

Modifier and Type	Field	Description
final String	ensemblName	The name in the Ensembl mapping file.
final String	ensemblType	The schema name for XML queries.

Method Summary

Modifier and Type	Method	Description
static EnsemblSpecies.EnsemblDivision	getEnsemblDivisionFromName(String ensemblName)	Returns the EnsemblDivision corresponding to the given Ensembl name.
static EnsemblSpecies.EnsemblDivision	valueOf(String name)	Returns the enum constant of this type with the specified name.
static EnsemblSpecies.EnsemblDivision[]	values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, describeConstable, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

vertebrates

public static final EnsemblSpecies.EnsemblDivision vertebrates

bacteria

public static final EnsemblSpecies.EnsemblDivision bacteria

fungi

public static final EnsemblSpecies.EnsemblDivision fungi

metazoa

public static final EnsemblSpecies.EnsemblDivision metazoa

plants

public static final EnsemblSpecies.EnsemblDivision plants

protists

public static final EnsemblSpecies.EnsemblDivision protists

Field Details

ensemblName

public final String ensemblName

The name in the Ensembl mapping file.

ensemblType

public final String ensemblType

The schema name for XML queries.

Method Details

values

public static EnsemblSpecies.EnsemblDivision[] values()

Returns an array containing the constants of this enum type, in the order they are declared.

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static EnsemblSpecies.EnsemblDivision valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

getEnsemblDivisionFromName

public static EnsemblSpecies.EnsemblDivision getEnsemblDivisionFromName(String ensemblName)

Returns the EnsemblDivision corresponding to the given Ensembl name. Null if not found.

Parameters:

ensemblName - the Ensembl name

Returns:

the EnsemblDivision