Uses of Enum
com.compomics.util.experiment.biology.taxonomy.mappings.EnsemblSpecies.EnsemblDivision

Packages that use EnsemblSpecies.EnsemblDivision

Package	Description
com.compomics.util.experiment.biology.genes	Classes related to genes.
com.compomics.util.experiment.biology.genes.ensembl	Classes for the handling of Ensembl data.
com.compomics.util.experiment.biology.taxonomy	Classes related to species and taxonomy.
com.compomics.util.experiment.biology.taxonomy.mappings	Classes related to species mapping.

Uses of EnsemblSpecies.EnsemblDivision in com.compomics.util.experiment.biology.genes

Methods in com.compomics.util.experiment.biology.genes with parameters of type EnsemblSpecies.EnsemblDivision

Modifier and Type	Method	Description
boolean	ProteinGeneDetailsProvider.downloadMappings(WaitingHandler waitingHandler, String speciesName, String ensemblDatasetName, EnsemblSpecies.EnsemblDivision ensemblDivision)	Try to download the gene and GO mappings for the currently selected species.

Uses of EnsemblSpecies.EnsemblDivision in com.compomics.util.experiment.biology.genes.ensembl

Methods in com.compomics.util.experiment.biology.genes.ensembl with parameters of type EnsemblSpecies.EnsemblDivision

Modifier and Type	Method	Description
static Integer	EnsemblVersion.getCurrentEnsemblVersion(EnsemblSpecies.EnsemblDivision ensemblDivision)	Returns the current Ensembl version number.
static String	EnsemblVersion.getEnsemblSchemaName(EnsemblSpecies.EnsemblDivision ensemblDivision)	Returns the name of the Ensembl schema for BioMart queries.

Uses of EnsemblSpecies.EnsemblDivision in com.compomics.util.experiment.biology.taxonomy

Methods in com.compomics.util.experiment.biology.taxonomy with parameters of type EnsemblSpecies.EnsemblDivision

Modifier and Type	Method	Description
String	SpeciesFactory.getEnsemblDatasetName(String latinName, EnsemblSpecies.EnsemblDivision ensemblDivision)	Returns the Ensemble dataset name.

Uses of EnsemblSpecies.EnsemblDivision in com.compomics.util.experiment.biology.taxonomy.mappings

Methods in com.compomics.util.experiment.biology.taxonomy.mappings that return EnsemblSpecies.EnsemblDivision

Modifier and Type	Method	Description
EnsemblSpecies.EnsemblDivision	EnsemblSpecies.getDivision(String latinName)	Returns the division corresponding to the given Latin name.
static EnsemblSpecies.EnsemblDivision	EnsemblSpecies.EnsemblDivision.getEnsemblDivisionFromName(String ensemblName)	Returns the EnsemblDivision corresponding to the given Ensembl name.
static EnsemblSpecies.EnsemblDivision	EnsemblSpecies.EnsemblDivision.valueOf(String name)	Returns the enum constant of this type with the specified name.
static EnsemblSpecies.EnsemblDivision[]	EnsemblSpecies.EnsemblDivision.values()	Returns an array containing the constants of this enum type, in the order they are declared.