Uses of Package
com.compomics.util.experiment.biology.taxonomy.mappings

Packages that use com.compomics.util.experiment.biology.taxonomy.mappings

Package	Description
com.compomics.util.experiment.biology.genes	Classes related to genes.
com.compomics.util.experiment.biology.genes.ensembl	Classes for the handling of Ensembl data.
com.compomics.util.experiment.biology.taxonomy	Classes related to species and taxonomy.
com.compomics.util.experiment.biology.taxonomy.mappings	Classes related to species mapping.

Classes in com.compomics.util.experiment.biology.taxonomy.mappings used by com.compomics.util.experiment.biology.genes

Class	Description
EnsemblSpecies.EnsemblDivision	Enum of the different Ensembl divisions.

Classes in com.compomics.util.experiment.biology.taxonomy.mappings used by com.compomics.util.experiment.biology.genes.ensembl

Class	Description
EnsemblSpecies.EnsemblDivision	Enum of the different Ensembl divisions.

Classes in com.compomics.util.experiment.biology.taxonomy.mappings used by com.compomics.util.experiment.biology.taxonomy

Class	Description
BiomartMapping	Mapping of the species to BioMart dataset.
EnsemblSpecies	Mapping of the Ensembl species.
EnsemblSpecies.EnsemblDivision	Enum of the different Ensembl divisions.
UniprotTaxonomy	Mapping of the UniProt species taken from https://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/complete/docs/speclist.txt.

Classes in com.compomics.util.experiment.biology.taxonomy.mappings used by com.compomics.util.experiment.biology.taxonomy.mappings

Class	Description
EnsemblSpecies.EnsemblDivision	Enum of the different Ensembl divisions.