Package com.compomics.util.experiment.biology.variants

Class AminoAcidSubstitution

java.lang.Object

com.compomics.util.experiment.biology.variants.AminoAcidSubstitution

public class AminoAcidSubstitution
extends Object

Class representing an amino acid substitution.

Author:

Marc Vaudel

Field Summary

Fields

Modifier and Type	Field	Description
final char	originalAminoAcid	The original amino acid represented by its single letter code.
final char	variantAminoAcid	The variant amino acid represented by its single letter code.

Constructor Summary

Constructors

Constructor	Description
AminoAcidSubstitution()	Empty default constructor
AminoAcidSubstitution(char originalAminoAcid, char variantAminoAcid)	Constructor.

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

originalAminoAcid

public final char originalAminoAcid

The original amino acid represented by its single letter code.

variantAminoAcid

public final char variantAminoAcid

The variant amino acid represented by its single letter code.

Constructor Details

AminoAcidSubstitution

public AminoAcidSubstitution()

Empty default constructor

AminoAcidSubstitution

public AminoAcidSubstitution(char originalAminoAcid,
 char variantAminoAcid)

Constructor.

Parameters:

originalAminoAcid - the original amino acid

variantAminoAcid - the variant amino acid