Uses of Interface
com.compomics.util.experiment.filtering.Filter

Packages that use Filter

Package	Description
com.compomics.util.experiment.filtering	Filtering classes.
com.compomics.util.experiment.identification.filtering	Classes for the filtering of identification objects.
com.compomics.util.gui.parameters.identification.advanced	Dialogs for advanced identification parameters.
com.compomics.util.parameters.identification.advanced	Advanced Identification parameters.

Uses of Filter in com.compomics.util.experiment.filtering

Methods in com.compomics.util.experiment.filtering that return Filter

Modifier and Type	Method	Description
Filter	Filter.clone()	Clones the filter.

Methods in com.compomics.util.experiment.filtering with parameters of type Filter

Modifier and Type	Method	Description
boolean	Filter.isSameAs(Filter anotherFilter)	Indicates whether another filter is the same as the current filter.

Uses of Filter in com.compomics.util.experiment.identification.filtering

Classes in com.compomics.util.experiment.identification.filtering that implement Filter

Modifier and Type	Class	Description
class	AssumptionFilter	Peptide Assumption filter.
class	MatchFilter	Abstract representing a filter.
class	PeptideFilter	Peptide filter.
class	ProteinFilter	Protein filter.
class	PsmFilter	PSM filter.

Methods in com.compomics.util.experiment.identification.filtering with parameters of type Filter

Modifier and Type	Method	Description
boolean	MatchFilter.isSameAs(Filter anotherFilter)

Uses of Filter in com.compomics.util.gui.parameters.identification.advanced

Methods in com.compomics.util.gui.parameters.identification.advanced that return Filter

Modifier and Type	Method	Description
Filter	ValidationQCParametersDialog.createPeptideFilter()	Creates a new peptide filter.
Filter	ValidationQCParametersDialog.createProteinFilter()	Creates a new protein filter.
Filter	ValidationQCParametersDialog.createPsmFilter()	Creates a new PSM filter.
Filter	ValidationQCParametersDialog.editFilter(Filter filter)	Edits the given filter.

Methods in com.compomics.util.gui.parameters.identification.advanced with parameters of type Filter

Modifier and Type	Method	Description
Filter	ValidationQCParametersDialog.editFilter(Filter filter)	Edits the given filter.

Uses of Filter in com.compomics.util.parameters.identification.advanced

Methods in com.compomics.util.parameters.identification.advanced that return types with arguments of type Filter

Modifier and Type	Method	Description
ArrayList<Filter>	ValidationQcParameters.getPeptideFilters()	Returns the list of peptide quality filters.
ArrayList<Filter>	ValidationQcParameters.getProteinFilters()	Returns the list of protein quality filters.
ArrayList<Filter>	ValidationQcParameters.getPsmFilters()	Returns the list of PSM quality filters.

Method parameters in com.compomics.util.parameters.identification.advanced with type arguments of type Filter

Modifier and Type	Method	Description
void	ValidationQcParameters.setPeptideFilters(ArrayList<Filter> peptideFilters)	Sets the list of peptide quality filters.
void	ValidationQcParameters.setProteinFilters(ArrayList<Filter> proteinFilters)	Sets the list of protein quality filters.
void	ValidationQcParameters.setPsmFilters(ArrayList<Filter> psmFilters)	Sets the list of PSM quality filters.