Uses of Enum
com.compomics.util.experiment.filtering.FilterItemComparator

Packages that use FilterItemComparator

Package	Description
com.compomics.util.experiment.filtering	Filtering classes.
com.compomics.util.experiment.identification.filtering	Classes for the filtering of identification objects.

Uses of FilterItemComparator in com.compomics.util.experiment.filtering

Methods in com.compomics.util.experiment.filtering that return FilterItemComparator

Modifier and Type	Method	Description
static FilterItemComparator	FilterItemComparator.valueOf(String name)	Returns the enum constant of this type with the specified name.
static FilterItemComparator[]	FilterItemComparator.values()	Returns an array containing the constants of this enum type, in the order they are declared.

Uses of FilterItemComparator in com.compomics.util.experiment.identification.filtering

Fields in com.compomics.util.experiment.identification.filtering with type parameters of type FilterItemComparator

Modifier and Type	Field	Description
protected HashMap<String,FilterItemComparator>	MatchFilter.comparatorsMap	Map of the comparators to use.

Methods in com.compomics.util.experiment.identification.filtering that return FilterItemComparator

Modifier and Type	Method	Description
FilterItemComparator	MatchFilter.getComparatorForItem(String itemName)	Returns the comparator set for a given filtering item.

Methods in com.compomics.util.experiment.identification.filtering with parameters of type FilterItemComparator

Modifier and Type	Method	Description
boolean	AssumptionFilter.isValidated(String itemName, FilterItemComparator filterItemComparator, Object value, long spectrumMatchKey, Identification identification, GeneMaps geneMaps, IdentificationFeaturesGenerator identificationFeaturesGenerator, IdentificationParameters identificationParameters, SequenceProvider sequenceProvider, ProteinDetailsProvider proteinDetailsProvider, SpectrumProvider spectrumProvider)
boolean	AssumptionFilter.isValidated(String itemName, FilterItemComparator filterItemComparator, Object value, long spectrumMatchKey, String spectrumFile, String spectrumTitle, PeptideAssumption peptideAssumption, Identification identification, SequenceProvider sequenceProvider, SpectrumProvider spectrumProvider, IdentificationFeaturesGenerator identificationFeaturesGenerator, IdentificationParameters identificationParameters)	Indicates whether the match designated by the match key validates the given item using the given comparator and value threshold.
abstract boolean	MatchFilter.isValidated(String itemName, FilterItemComparator filterItemComparator, Object value, long matchKey, Identification identification, GeneMaps geneMaps, IdentificationFeaturesGenerator identificationFeaturesGenerator, IdentificationParameters identificationParameters, SequenceProvider sequenceProvider, ProteinDetailsProvider proteinDetailsProvider, SpectrumProvider spectrumProvider)	Indicates whether the match designated by the match key validates the given item using the given comparator and value threshold.
boolean	PeptideFilter.isValidated(String itemName, FilterItemComparator filterItemComparator, Object value, long matchKey, Identification identification, GeneMaps geneMaps, IdentificationFeaturesGenerator identificationFeaturesGenerator, IdentificationParameters identificationParameters, SequenceProvider sequenceProvider, ProteinDetailsProvider proteinDetailsProvider, SpectrumProvider spectrumProvider)
boolean	ProteinFilter.isValidated(String itemName, FilterItemComparator filterItemComparator, Object value, long matchKey, Identification identification, GeneMaps geneMaps, IdentificationFeaturesGenerator identificationFeaturesGenerator, IdentificationParameters identificationParameters, SequenceProvider sequenceProvider, ProteinDetailsProvider proteinDetailsProvider, SpectrumProvider spectrumProvider)
boolean	PsmFilter.isValidated(String itemName, FilterItemComparator filterItemComparator, Object value, long matchKey, Identification identification, GeneMaps geneMaps, IdentificationFeaturesGenerator identificationFeaturesGenerator, IdentificationParameters identificationParameters, SequenceProvider sequenceProvider, ProteinDetailsProvider proteinDetailsProvider, SpectrumProvider spectrumProvider)
void	MatchFilter.setComparatorForItem(String itemName, FilterItemComparator filterItemComparator)	Sets the comparator for a given item.
void	MatchFilter.setFilterItem(String itemName, FilterItemComparator filterItemComparator, Object value)	Sets an item to the filter.