Uses of Class
com.compomics.util.experiment.identification.matches.PeptideMatch

Packages that use PeptideMatch

Package	Description
com.compomics.util.experiment.identification	Experiment classes related to identifications.
com.compomics.util.experiment.identification.matches_iterators	Identification match iterators.
com.compomics.util.gui.modification	PTM GUI dialogs.

Uses of PeptideMatch in com.compomics.util.experiment.identification

Methods in com.compomics.util.experiment.identification that return PeptideMatch

Modifier and Type	Method	Description
PeptideMatch	Identification.getPeptideMatch(long key)	Returns the peptide match with the given key.

Methods in com.compomics.util.experiment.identification with parameters of type PeptideMatch

Modifier and Type	Method	Description
void	Identification.addPeptideMatch(long key, PeptideMatch peptideMatch)	Adds a peptide match.

Uses of PeptideMatch in com.compomics.util.experiment.identification.matches_iterators

Methods in com.compomics.util.experiment.identification.matches_iterators that return PeptideMatch

Modifier and Type	Method	Description
PeptideMatch	PeptideMatchesIterator.next()	Returns the next match and updates the buffer.

Uses of PeptideMatch in com.compomics.util.gui.modification

Constructors in com.compomics.util.gui.modification with parameters of type PeptideMatch

Modifier	Constructor	Description
	ModificationTable(Identification identification, AnnotationParameters annotationParameters, PeptideMatch peptideMatch, Modification modification, boolean areaChart, ModificationParameters modificationParameters, SequenceProvider sequenceProvider, SpectrumProvider spectrumProvider, SequenceMatchingParameters modificationSequenceMatchingParameters)	Constructor.