Package com.compomics.util.experiment.identification.modification.peptide_mapping.performance

Class HistoneExample

java.lang.Object

com.compomics.util.experiment.identification.modification.peptide_mapping.performance.HistoneExample

public class HistoneExample
extends Object

Convenience class extracting the data needed to plot the modification matching.

Author:

Marc Vaudel

Constructor Summary

Constructors

Constructor	Description
HistoneExample()

Method Summary

Modifier and Type	Method	Description
static void	close()
static void	exportHistoneData(String sequence, HashMap<Double,int[]> modificationToPossibleSiteMap, HashMap<Double,Integer> modificationOccurrenceMap, HashMap<Double,HashMap<Integer,Double>> modificationToSiteToScore, HashMap<Double,TreeSet<Integer>> mapping, double score)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

HistoneExample

public HistoneExample()

Method Details

exportHistoneData

public static void exportHistoneData(String sequence,
 HashMap<Double,int[]> modificationToPossibleSiteMap,
 HashMap<Double,Integer> modificationOccurrenceMap,
 HashMap<Double,HashMap<Integer,Double>> modificationToSiteToScore,
 HashMap<Double,TreeSet<Integer>> mapping,
 double score)

close

public static void close()