Package com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features.generic

Class IonFeature

java.lang.Object

com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features.generic.IonFeature

All Implemented Interfaces:

Ms2pipFeature

Direct Known Subclasses:

ComplementaryIonFeature, ForwardIonFeature

public abstract class IonFeature
extends Object
implements Ms2pipFeature

Feature based on a property of an ion.

Author:

Marc Vaudel

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static enum	IonFeature.Property	Enum for the possible features.

Field Summary

Fields

Modifier and Type	Field	Description
protected IonFeature.Property	property	The peptide feature.

Fields inherited from interface com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.Ms2pipFeature

implementations

Constructor Summary

Constructors

Constructor	Description
IonFeature()	Empty default constructor

Method Summary

Modifier and Type	Method	Description
String	getCategory()	Returns the category of the feature.
IonFeature.Property	getFeature()	Returns the peptide feature;
void	setFeature(IonFeature.Property feature)	Sets the peptide feature.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.Ms2pipFeature

getDescription, getIndex

Field Details

property

protected IonFeature.Property property

The peptide feature.

Constructor Details

IonFeature

public IonFeature()

Empty default constructor

Method Details

getFeature

public IonFeature.Property getFeature()

Returns the peptide feature;

Returns:

the peptide feature

setFeature

public void setFeature(IonFeature.Property feature)

Sets the peptide feature.

Parameters:

feature - the peptide feature

getCategory

public String getCategory()

Description copied from interface: Ms2pipFeature

Returns the category of the feature.

Specified by:

getCategory in interface Ms2pipFeature

Returns:

the category of the feature