Uses of Class
com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features.generic.AAPropertyFeature

Packages that use AAPropertyFeature

Package	Description
com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features	This package contains features implemented for ms2pip.

Uses of AAPropertyFeature in com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features

Subclasses of AAPropertyFeature in com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features

Modifier and Type	Class	Description
class	AAPropertyFeatureAbsolute	An amino acid property feature at a fixed position on the peptide sequence.
class	AAPropertyFeatureRelative	An amino acid property feature at a position relative to the end of an ion on the peptide sequence.

Methods in com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features that return AAPropertyFeature

Modifier and Type	Method	Description
AAPropertyFeature	AAPropertyRelationshipFeature.getAminoAcidFeature1()	Returns the first amino acid feature.
AAPropertyFeature	AAPropertyRelationshipFeature.getAminoAcidFeature2()	Returns the second amino acid feature.

Methods in com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features with parameters of type AAPropertyFeature

Modifier and Type	Method	Description
void	AAPropertyRelationshipFeature.setAminoAcidFeature1(AAPropertyFeature aminoAcidFeature1)	Sets the first amino acid feature.
void	AAPropertyRelationshipFeature.setAminoAcidFeature2(AAPropertyFeature aminoAcidFeature2)	Sets the second amino acid feature.

Constructors in com.compomics.util.experiment.identification.peptide_fragmentation.models.ms2pip.features_configuration.features with parameters of type AAPropertyFeature

Modifier	Constructor	Description
	AAPropertyRelationshipFeature(AAPropertyRelationshipFeature.Relationship relationship, AAPropertyFeature aminoAcidFeature1, AAPropertyFeature aminoAcidFeature2)	Constructor.