Uses of Class
com.compomics.util.experiment.identification.peptide_shaker.ModificationScoring

Packages that use ModificationScoring

Package	Description
com.compomics.util.experiment.identification.peptide_shaker	Experiment classes used in PeptideShaker calculations.

Uses of ModificationScoring in com.compomics.util.experiment.identification.peptide_shaker

Methods in com.compomics.util.experiment.identification.peptide_shaker that return ModificationScoring

Modifier and Type	Method	Description
ModificationScoring	PSModificationScores.getModificationScoring(String modName)	Returns the modification scoring for the desired modification (null if none found).

Methods in com.compomics.util.experiment.identification.peptide_shaker with parameters of type ModificationScoring

Modifier and Type	Method	Description
void	ModificationScoring.addAll(ModificationScoring anotherScore)	Adds all scores from another score if better.
void	PSModificationScores.addModificationScoring(String modName, ModificationScoring modificationScoring)	Adds a scoring result for the modification of interest.