Package com.compomics.util.experiment.identification.protein_sequences

package com.compomics.util.experiment.identification.protein_sequences

Protein sequence handling related classes.

Related Packages

Package	Description
com.compomics.util.experiment.identification	Experiment classes related to identifications.
com.compomics.util.experiment.identification.protein_sequences.digestion	This package contains classes used to digest protein sequences into peptides.

Classes

Class	Description
AaOccurrence	This class gathers statistics on the occurrence of amino acids in a fasta file.
AmbiguousSequenceIterator	Iterator going through the possible sequences of a sequence containing combinations of amino acids.
SingleProteinSequenceProvider	Sequence provider for a single protein.