Package com.compomics.util.experiment.identification.spectrum_assumptions

Class PeptideAssumptionParameter

java.lang.Object

com.compomics.util.experiment.identification.spectrum_assumptions.PeptideAssumptionParameter

All Implemented Interfaces:

UrParameter, Serializable

public class PeptideAssumptionParameter
extends Object
implements UrParameter, Serializable

Parameter for storing additional non-mandatory peptide assumption information.

Author:

Harald Barsens

See Also:

• Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
static final PeptideAssumptionParameter	dummy	An empty parameter used for instantiation.

Constructor Summary

Constructors

Constructor	Description
PeptideAssumptionParameter()	Constructor.
PeptideAssumptionParameter(Double ms1Intensity)	Constructor.

Method Summary

Modifier and Type	Method	Description
Double	getMs1Intensity()	Returns the MS1 intensity.
long	getParameterKey()	This method returns the key of the parameter.
void	setMs1Intensity(Double ms1Intensity)	Set the MS1 intensity.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

dummy

public static final PeptideAssumptionParameter dummy

An empty parameter used for instantiation.

Constructor Details

PeptideAssumptionParameter

public PeptideAssumptionParameter()

Constructor.

PeptideAssumptionParameter

public PeptideAssumptionParameter(Double ms1Intensity)

Constructor.

Parameters:

ms1Intensity - the MS1 intensity

Method Details

getParameterKey

public long getParameterKey()

Description copied from interface: UrParameter

This method returns the key of the parameter. The key must be unique to the type of parameter.

Specified by:

getParameterKey in interface UrParameter

Returns:

the parameter key

getMs1Intensity

public Double getMs1Intensity()

Returns the MS1 intensity.

Returns:

the MS1 intensity

setMs1Intensity

public void setMs1Intensity(Double ms1Intensity)

Set the MS1 intensity.

Parameters:

ms1Intensity - the MS1 intensity