Package com.compomics.util.experiment.io.biology.protein

Enum ProteinDatabase

java.lang.Object
java.lang.Enum<ProteinDatabase>
com.compomics.util.experiment.io.biology.protein.ProteinDatabase
All Implemented Interfaces:
Serializable, Comparable<ProteinDatabase>, java.lang.constant.Constable
public enum ProteinDatabase extends Enum<ProteinDatabase>
Enum of the supported protein databases.
Author:
Marc Vaudel

  • Enum Constant Details

  • Field Details

    • fullName

      public final String fullName
      The full name of the database.

    • pmid

      public final String pmid
      The PubMed id of the database.

  • Method Details

    • values

      public static ProteinDatabase[] values()
      Returns an array containing the constants of this enum type, in the order they are declared.
      Returns:
      an array containing the constants of this enum type, in the order they are declared

    • valueOf

      public static ProteinDatabase valueOf(String name)
      Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)
      Parameters:
      name - the name of the enum constant to be returned.
      Returns:
      the enum constant with the specified name
      Throws:
      IllegalArgumentException - if this enum type has no constant with the specified name
      NullPointerException - if the argument is null

    • getFullName

      public String getFullName()
      Returns the full name of the database, null if not set.
      Returns:
      the full name of the database

    • getPmid

      public String getPmid()
      Returns the PubMed id of the database, null if not set.
      Returns:
      the PubMed id of the database

    • getProteinDatabase

      public ProteinDatabase getProteinDatabase(String fullName)
      Returns the protein database with the given full name, null if not found.
      Parameters:
      fullName - the database full name
      Returns:
      the protein database