Package com.compomics.util.experiment.quantification.spectrumcounting

Enum SpectrumCountingMethod

java.lang.Object

java.lang.Enum<SpectrumCountingMethod>

com.compomics.util.experiment.quantification.spectrumcounting.SpectrumCountingMethod

All Implemented Interfaces:

Serializable, Comparable<SpectrumCountingMethod>, java.lang.constant.Constable

public enum SpectrumCountingMethod
extends Enum<SpectrumCountingMethod>

Enum of the implemented spectrum quantification methods.

Author:

Marc Vaudel, Harald Barsnes

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
EMPAI	Exponentially modified protein abundance index (emPAI).
LFQ	Label-free quantification.
NSAF	Normalized Spectral Abundance Factor (NSAF).

Method Summary

Modifier and Type	Method	Description
String	toString()
static SpectrumCountingMethod	valueOf(String name)	Returns the enum constant of this type with the specified name.
static SpectrumCountingMethod[]	values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, describeConstable, equals, finalize, getDeclaringClass, hashCode, name, ordinal, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

EMPAI

public static final SpectrumCountingMethod EMPAI

Exponentially modified protein abundance index (emPAI).

NSAF

public static final SpectrumCountingMethod NSAF

Normalized Spectral Abundance Factor (NSAF).

LFQ

public static final SpectrumCountingMethod LFQ

Label-free quantification.

Method Details

values

public static SpectrumCountingMethod[] values()

Returns an array containing the constants of this enum type, in the order they are declared.

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static SpectrumCountingMethod valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

toString

public String toString()

Overrides:

toString in class Enum<SpectrumCountingMethod>