Package com.compomics.util.experiment.refinement_parameters

Class PepnovoAssumptionDetails

java.lang.Object

com.compomics.util.experiment.personalization.ExperimentObject

com.compomics.util.experiment.refinement_parameters.PepnovoAssumptionDetails

All Implemented Interfaces:

UrParameter, Serializable

public class PepnovoAssumptionDetails
extends ExperimentObject
implements UrParameter

This class contains pepnovo assumption details which are not contained in the tag assumption class which will be saved as additional parameter.

Author:

Marc Vaudel

See Also:

• Serialized Form

Field Summary

Fields inherited from class com.compomics.util.experiment.personalization.ExperimentObject

NO_KEY

Constructor Summary

Constructors

Constructor	Description
PepnovoAssumptionDetails()	Constructor.

Method Summary

Modifier and Type	Method	Description
double	getMH()	Returns the PepNovo mH.
long	getParameterKey()	This method returns the key of the parameter.
double	getRankScore()	Returns the PepNovo rank score.
void	setMH(double mH)	Sets the PepNovo provided mH.
void	setRankScore(double rankScore)	Sets the PepNovo rank score.

Methods inherited from class com.compomics.util.experiment.personalization.ExperimentObject

addUrParam, asLong, clearParametersMap, getId, getUrParam, getUrParams, removeUrParam, setId, setUrParams

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

PepnovoAssumptionDetails

public PepnovoAssumptionDetails()

Constructor.

Method Details

getRankScore

public double getRankScore()

Returns the PepNovo rank score.

Returns:

the PepNovo rank score

setRankScore

public void setRankScore(double rankScore)

Sets the PepNovo rank score.

Parameters:

rankScore - the PepNovo rank score

getMH

public double getMH()

Returns the PepNovo mH.

Returns:

the PepNovo mH

setMH

public void setMH(double mH)

Sets the PepNovo provided mH.

Parameters:

mH - the PepNovo mH

getParameterKey

public long getParameterKey()

Description copied from interface: UrParameter

This method returns the key of the parameter. The key must be unique to the type of parameter.

Specified by:

getParameterKey in interface UrParameter

Returns:

the parameter key