Uses of Class
com.compomics.util.general.BoxedObject

Packages that use BoxedObject

Package	Description
com.compomics.util.experiment.identification.protein_sequences.digestion	This package contains classes used to digest protein sequences into peptides.

Uses of BoxedObject in com.compomics.util.experiment.identification.protein_sequences.digestion

Methods in com.compomics.util.experiment.identification.protein_sequences.digestion with parameters of type BoxedObject

Modifier and Type	Method	Description
ExtendedPeptide	PeptideDraft.getPeptide(double massMin, double massMax, BoxedObject<Boolean> smallMass)	Returns a peptide from the peptide draft.
ExtendedPeptide	ProteinIteratorUtils.getPeptideFromProtein(char[] peptideSequence, String proteinSequence, int indexOnProtein, double massMin, double massMax, BoxedObject<Boolean> smallMass)	Returns a peptide from the given sequence on the given protein.